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ZEB1 zinc finger E-box binding homeobox 1 [ Mustela putorius furo (domestic ferret) ]

Gene ID: 101670230, updated on 8-Mar-2024

Summary

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Gene symbol
ZEB1
Gene description
zinc finger E-box binding homeobox 1
See related
Ensembl:ENSMPUG00000013033
Gene type
protein coding
RefSeq status
MODEL
Organism
Mustela putorius furo (sub-species: furo)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Mustelinae; Mustela
Also known as
TCF8
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
102 current ASM1176430v1.1 (GCF_011764305.1) Unplaced Scaffold NW_025422060.1 (5794806..5984638, complement)
101 previous assembly MusPutFur1.0 (GCF_000215625.1) Unplaced Scaffold NW_004569401.1 (1048118..1201550)

NW_025422060.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L34-like Neighboring gene Rho GTPase activating protein 12 Neighboring gene uncharacterized LOC101694604 Neighboring gene uncharacterized LOC123388847

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De-novo transcriptome sequencing of a normalized cDNA pool from influenza infected ferrets. Camp JV, et al. PLoS One, 2012. PMID 22606336, Free PMC Article
  2. Sequencing, annotation, and characterization of the influenza ferret infectome. León AJ, et al. J Virol, 2013 Feb. PMID 23236062, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in anatomical structure development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger E-box-binding homeobox 1
Names
transcription factor 8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mustela putorius furo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1176430v1.1 Primary Assembly

Genomic

  1. NW_025422060.1 Reference ASM1176430v1.1 Primary Assembly

    Range
    5794806..5984638 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045069140.1 → XP_044925075.1  zinc finger E-box-binding homeobox 1 isoform X5

    UniProtKB/TrEMBL
    A0A8U0RIG3, M3YNM7
    Conserved Domains (4) summary
    sd00017
    Location:797 → 817
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:132 → 154
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:837 → 862
    zf-H2C2_2; Zinc-finger double domain
    cl00084
    Location:472 → 520
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.

  2. XM_045069141.1 → XP_044925076.1  zinc finger E-box-binding homeobox 1 isoform X6

    UniProtKB/TrEMBL
    A0A8U0USR8, M3YNM7
    Conserved Domains (4) summary
    smart00355
    Location:131 → 153
    ZnF_C2H2; zinc finger
    smart00389
    Location:483 → 519
    HOX; Homeodomain
    COG5048
    Location:819 → 872
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:796 → 816
    ZF_C2H2; C2H2 Zn finger [structural motif]

  3. XM_045069135.1 → XP_044925070.1  zinc finger E-box-binding homeobox 1 isoform X5

    UniProtKB/TrEMBL
    A0A8U0RIG3, M3YNM7
    Conserved Domains (4) summary
    sd00017
    Location:797 → 817
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:132 → 154
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:837 → 862
    zf-H2C2_2; Zinc-finger double domain
    cl00084
    Location:472 → 520
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.

  4. XM_045069134.1 → XP_044925069.1  zinc finger E-box-binding homeobox 1 isoform X4

    UniProtKB/TrEMBL
    A0A8U0UQM1, M3YNM7
    Conserved Domains (4) summary
    smart00355
    Location:232 → 254
    ZnF_C2H2; zinc finger
    smart00389
    Location:584 → 620
    HOX; Homeodomain
    COG5048
    Location:920 → 973
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:897 → 917
    ZF_C2H2; C2H2 Zn finger [structural motif]

  5. XM_045069132.1 → XP_044925067.1  zinc finger E-box-binding homeobox 1 isoform X2

    UniProtKB/TrEMBL
    A0A8U0RKX6, M3YNM7
    Conserved Domains (5) summary
    smart00355
    Location:240 → 262
    ZnF_C2H2; zinc finger
    smart00389
    Location:592 → 628
    HOX; Homeodomain
    COG5048
    Location:928 → 981
    COG5048; FOG: Zn-finger [General function prediction only]
    COG5271
    Location:27 → 197
    MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]
    sd00017
    Location:905 → 925
    ZF_C2H2; C2H2 Zn finger [structural motif]

  6. XM_045069133.1 → XP_044925068.1  zinc finger E-box-binding homeobox 1 isoform X3

    UniProtKB/TrEMBL
    A0A8U0RJA2, M3YNM7
    Conserved Domains (4) summary
    smart00355
    Location:233 → 255
    ZnF_C2H2; zinc finger
    smart00389
    Location:585 → 621
    HOX; Homeodomain
    COG5048
    Location:921 → 974
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:898 → 918
    ZF_C2H2; C2H2 Zn finger [structural motif]

  7. XM_045069131.1 → XP_044925066.1  zinc finger E-box-binding homeobox 1 isoform X1

    UniProtKB/TrEMBL
    A0A8U0RKU7, M3YNM7
    Conserved Domains (4) summary
    smart00355
    Location:241 → 263
    ZnF_C2H2; zinc finger
    smart00389
    Location:593 → 629
    HOX; Homeodomain
    COG5048
    Location:929 → 982
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:906 → 926
    ZF_C2H2; C2H2 Zn finger [structural motif]

  8. XM_045069137.1 → XP_044925072.1  zinc finger E-box-binding homeobox 1 isoform X5

    UniProtKB/TrEMBL
    A0A8U0RIG3, M3YNM7
    Conserved Domains (4) summary
    sd00017
    Location:797 → 817
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:132 → 154
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:837 → 862
    zf-H2C2_2; Zinc-finger double domain
    cl00084
    Location:472 → 520
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.

  9. XM_045069138.1 → XP_044925073.1  zinc finger E-box-binding homeobox 1 isoform X5

    UniProtKB/TrEMBL
    A0A8U0RIG3, M3YNM7
    Conserved Domains (4) summary
    sd00017
    Location:797 → 817
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:132 → 154
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:837 → 862
    zf-H2C2_2; Zinc-finger double domain
    cl00084
    Location:472 → 520
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.

  10. XM_045069136.1 → XP_044925071.1  zinc finger E-box-binding homeobox 1 isoform X5

    UniProtKB/TrEMBL
    A0A8U0RIG3, M3YNM7
    Conserved Domains (4) summary
    sd00017
    Location:797 → 817
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:132 → 154
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:837 → 862
    zf-H2C2_2; Zinc-finger double domain
    cl00084
    Location:472 → 520
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.

  11. XM_045069139.1 → XP_044925074.1  zinc finger E-box-binding homeobox 1 isoform X5

    UniProtKB/TrEMBL
    A0A8U0RIG3, M3YNM7
    Conserved Domains (4) summary
    sd00017
    Location:797 → 817
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:132 → 154
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:837 → 862
    zf-H2C2_2; Zinc-finger double domain
    cl00084
    Location:472 → 520
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
Nucleotide Protein
Heading Accession and Version

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