U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    SLC1A4 solute carrier family 1 member 4 [ Canis lupus familiaris (dog) ]

    Gene ID: 481391, updated on 5-Mar-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    SLC1A4provided by VGNC
    Official Full Name
    solute carrier family 1 member 4provided by VGNC
    Primary source
    VGNC:VGNC:46264
    See related
    Ensembl:ENSCAFG00845020925
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Also known as
    ASCT1
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See SLC1A4 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 10 NC_051814.1 (65493157..65518318)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 10 NC_006592.4 (64369739..64394932)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 10 NC_049231.1 (65774013..65799174)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 10 NC_049270.1 (65172083..65197216)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 10 NC_049751.1 (65480918..65503851)

    Chromosome 10 - NC_051814.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119873782 Neighboring gene uncharacterized LOC111097786 Neighboring gene uncharacterized LOC119873699 Neighboring gene U1 small nuclear ribonucleoprotein C-like Neighboring gene centrosomal protein 68

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Canine ASCT1 and ASCT2 are functional receptors for RD-114 virus in dogs. Yoshikawa R, et al. J Gen Virol, 2012 Mar. PMID 22131312

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables L-alanine transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables L-aspartate transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables L-serine transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables L-threonine transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables symporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in L-glutamate transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in L-serine transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    neutral amino acid transporter A
    Names
    alanine/serine/cysteine/threonine transporter 1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051814.1 Reference ROS_Cfam_1.0

      Range
      65493157..65518318
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038680770.1 → XP_038536698.1  neutral amino acid transporter A

      UniProtKB/TrEMBL
      A0A8C0LN80, A0A8I3S220
      Related
      ENSCAFP00845028925.1, ENSCAFT00845036942.1
      Conserved Domains (1) summary
      pfam00375
      Location:69 → 474
      SDF; Sodium:dicarboxylate symporter family

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049270.1 Alternate UMICH_Zoey_3.1

      Range
      65172083..65197216
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038489460.1 → XP_038345388.1  neutral amino acid transporter A

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049751.1 Alternate UNSW_CanFamBas_1.0

      Range
      65480918..65503851
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038615383.1 → XP_038471311.1  neutral amino acid transporter A

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049231.1 Alternate UU_Cfam_GSD_1.0

      Range
      65774013..65799174
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038551449.1 → XP_038407377.1  neutral amino acid transporter A

      UniProtKB/TrEMBL
      A0A8C0LN80, A0A8C0Q4G4, A0A8P0S969

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006592.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      64369739..64394932
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_538511.7 → XP_538511.4  neutral amino acid transporter A

      UniProtKB/TrEMBL
      A0A8C0LN80, A0A8C0Q4G4, A0A8P0S969
      Conserved Domains (1) summary
      pfam00375
      Location:69 → 474
      SDF; Sodium:dicarboxylate symporter family
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials