U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    JCHAIN joining chain of multimeric IgA and IgM [ Canis lupus familiaris (dog) ]

    Gene ID: 475166, updated on 5-Mar-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    JCHAINprovided by VGNC
    Official Full Name
    joining chain of multimeric IgA and IgMprovided by VGNC
    Primary source
    VGNC:VGNC:42184
    See related
    Ensembl:ENSCAFG00845010824
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Also known as
    IGJ
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    chromosome: 13
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 13 NC_051817.1 (60768302..60776517, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 13 NC_006595.4 (59696732..59704944, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 13 NC_049234.1 (61022208..61030422, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 13 NC_049273.1 (60383502..60391719, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 13 NC_049754.1 (59875272..59883488, complement)

    Chromosome 13 - NC_051817.1Genomic Context describing neighboring genes Neighboring gene ameloblastin Neighboring gene enamelin Neighboring gene uncharacterized LOC119874469 Neighboring gene UTP3 small subunit processome component

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Quantitative real-time RT-PCR measurement of mRNA encoding alpha-chain, pIgR and J-chain from canine duodenal mucosa. Peters IR, et al. J Immunol Methods, 2003 Apr 1. PMID 12667685

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables immunoglobulin receptor binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in humoral immune response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of pentameric IgM immunoglobulin complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    immunoglobulin J chain
    Names
    immunoglobulin J polypeptide, linker protein for immunoglobulin alpha and mu polypeptides

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051817.1 Reference ROS_Cfam_1.0

      Range
      60768302..60776517 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038685840.1 → XP_038541768.1  immunoglobulin J chain

      UniProtKB/TrEMBL
      A0A8C0LRG8, A0A8C0Q3V1, A0A8C0QCC9, A0A8I3RW25
      Related
      ENSCAFP00845014920.1, ENSCAFT00845019099.1
      Conserved Domains (1) summary
      pfam15097
      Location:26 → 159
      Ig_J_chain; Immunoglobulin J chain

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049273.1 Alternate UMICH_Zoey_3.1

      Range
      60383502..60391719 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038493979.1 → XP_038349907.1  immunoglobulin J chain

      Conserved Domains (1) summary
      pfam15097
      Location:26 → 159
      Ig_J_chain; Immunoglobulin J chain

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049754.1 Alternate UNSW_CanFamBas_1.0

      Range
      59875272..59883488 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038620207.1 → XP_038476135.1  immunoglobulin J chain

      Conserved Domains (1) summary
      pfam15097
      Location:26 → 159
      Ig_J_chain; Immunoglobulin J chain

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049234.1 Alternate UU_Cfam_GSD_1.0

      Range
      61022208..61030422 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038556270.1 → XP_038412198.1  immunoglobulin J chain

      UniProtKB/TrEMBL
      A0A8C0LRG8, A0A8C0Q3V1, A0A8C0QCC9, A0A8I3RW25
      Conserved Domains (1) summary
      pfam15097
      Location:26 → 159
      Ig_J_chain; Immunoglobulin J chain

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006595.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      59696732..59704944 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_532398.7 → XP_532398.2  immunoglobulin J chain

      UniProtKB/TrEMBL
      A0A8C0LRG8, A0A8C0Q3V1, A0A8C0QCC9, A0A8I3RW25
      Conserved Domains (1) summary
      pfam15097
      Location:26 → 159
      Ig_J_chain; Immunoglobulin J chain
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.