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    SMC2 structural maintenance of chromosomes 2 [ Canis lupus familiaris (dog) ]

    Gene ID: 481637, updated on 5-Mar-2024

    Summary

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    Official Symbol
    SMC2provided by VGNC
    Official Full Name
    structural maintenance of chromosomes 2provided by VGNC
    Primary source
    VGNC:VGNC:46543
    See related
    Ensembl:ENSCAFG00845009653
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 11
    Exon count:
    26
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 11 NC_051815.1 (61224131..61287560)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 11 NC_006593.4 (58551880..58615431)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 11 NC_049232.1 (60447777..60511198)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 11 NC_049271.1 (59747900..59811305)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 11 NC_049752.1 (59760321..59823705)

    Chromosome 11 - NC_051815.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111098113 Neighboring gene uncharacterized LOC111098114 Neighboring gene F-actin-capping protein subunit alpha-1-like Neighboring gene topoisomerase I binding, arginine and serine rich like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in chromosome organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chromosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    structural maintenance of chromosomes protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051815.1 Reference ROS_Cfam_1.0

      Range
      61224131..61287560
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038682323.1 → XP_038538251.1  structural maintenance of chromosomes protein 2

      UniProtKB/TrEMBL
      A0A8C0QDC2, A0A8I3N8F3, A0A8P0S8Q3
      Conserved Domains (1) summary
      COG1196
      Location:1 → 1168
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

    2. XM_038682324.1 → XP_038538252.1  structural maintenance of chromosomes protein 2

      UniProtKB/TrEMBL
      A0A8C0QDC2, A0A8I3N8F3, A0A8P0S8Q3
      Related
      ENSCAFP00845013258.1, ENSCAFT00845017020.1
      Conserved Domains (1) summary
      COG1196
      Location:1 → 1168
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

    3. XM_038682325.1 → XP_038538253.1  structural maintenance of chromosomes protein 2

      UniProtKB/TrEMBL
      A0A8C0QDC2, A0A8I3N8F3, A0A8P0S8Q3
      Conserved Domains (1) summary
      COG1196
      Location:1 → 1168
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049271.1 Alternate UMICH_Zoey_3.1

      Range
      59747900..59811305
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038490867.1 → XP_038346795.1  structural maintenance of chromosomes protein 2

      Conserved Domains (1) summary
      COG1196
      Location:1 → 1168
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

    2. XM_038490868.1 → XP_038346796.1  structural maintenance of chromosomes protein 2

      Conserved Domains (1) summary
      COG1196
      Location:1 → 1168
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

    3. XM_038490869.1 → XP_038346797.1  structural maintenance of chromosomes protein 2

      Conserved Domains (1) summary
      COG1196
      Location:1 → 1168
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049752.1 Alternate UNSW_CanFamBas_1.0

      Range
      59760321..59823705
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038616870.1 → XP_038472798.1  structural maintenance of chromosomes protein 2

      Conserved Domains (1) summary
      COG1196
      Location:1 → 1168
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

    2. XM_038616871.1 → XP_038472799.1  structural maintenance of chromosomes protein 2

      Conserved Domains (1) summary
      COG1196
      Location:1 → 1168
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

    3. XM_038616872.1 → XP_038472800.1  structural maintenance of chromosomes protein 2

      Conserved Domains (1) summary
      COG1196
      Location:1 → 1168
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049232.1 Alternate UU_Cfam_GSD_1.0

      Range
      60447777..60511198
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038552987.1 → XP_038408915.1  structural maintenance of chromosomes protein 2

      UniProtKB/TrEMBL
      A0A8C0QDC2, A0A8I3N8F3, A0A8P0S8Q3
      Conserved Domains (1) summary
      COG1196
      Location:1 → 1168
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

    2. XM_038552989.1 → XP_038408917.1  structural maintenance of chromosomes protein 2

      UniProtKB/TrEMBL
      A0A8C0QDC2, A0A8I3N8F3, A0A8P0S8Q3
      Conserved Domains (1) summary
      COG1196
      Location:1 → 1168
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

    3. XM_038552990.1 → XP_038408918.1  structural maintenance of chromosomes protein 2

      UniProtKB/TrEMBL
      A0A8C0QDC2, A0A8I3N8F3, A0A8P0S8Q3
      Conserved Domains (1) summary
      COG1196
      Location:1 → 1168
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006593.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      58551880..58615431
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_538759.7 → XP_538759.4  structural maintenance of chromosomes protein 2

      UniProtKB/TrEMBL
      A0A8C0QDC2, A0A8I3N8F3, A0A8P0S8Q3
      Conserved Domains (1) summary
      COG1196
      Location:1 → 1168
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

    2. XM_014117889.3 → XP_013973364.1  structural maintenance of chromosomes protein 2

      UniProtKB/TrEMBL
      A0A8C0QDC2, A0A8I3N8F3, A0A8P0S8Q3
      Conserved Domains (1) summary
      COG1196
      Location:1 → 1168
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

    3. XM_038662004.1 → XP_038517932.1  structural maintenance of chromosomes protein 2

      UniProtKB/TrEMBL
      A0A8C0QDC2, A0A8I3N8F3, A0A8P0S8Q3
      Conserved Domains (1) summary
      COG1196
      Location:1 → 1168
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    Nucleotide Protein
    Heading Accession and Version

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