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    PTCH1 patched 1 [ Canis lupus familiaris (dog) ]

    Gene ID: 484137, updated on 5-Mar-2024

    Summary

    Official Symbol
    PTCH1provided by VGNC
    Official Full Name
    patched 1provided by VGNC
    Primary source
    VGNC:VGNC:49951
    See related
    Ensembl:ENSCAFG00845003905
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Location:
    chromosome: 1
    Exon count:
    31
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 1 NC_051805.1 (71542960..71613625)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 1 NC_006583.4 (72001309..72071860)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 1 NC_049222.1 (71824991..71895587)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 1 NC_049261.1 (71355076..71425574)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 1 NC_049742.1 (71118402..71189186)

    Chromosome 1 - NC_051805.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111090717 Neighboring gene uncharacterized LOC119866365 Neighboring gene uncharacterized LOC119870810 Neighboring gene uncharacterized LOC111096354 Neighboring gene uncharacterized LOC102151730 Neighboring gene metal transporter CNNM3-like

    Genomic regions, transcripts, and products

    General gene information

    Markers

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables hedgehog family protein binding IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    enables hedgehog receptor activity IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    enables smoothened binding IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in smoothened signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    PubMed 

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051805.1 Reference ROS_Cfam_1.0

      Range
      71542960..71613625
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038654956.1XP_038510884.1  protein patched homolog 1 isoform X2

      UniProtKB/TrEMBL
      A0A8C0Q3B2, A0A8C0QIP4, A0A8I3N7F5
      Related
      ENSCAFP00845005710.1, ENSCAFT00845007174.1
      Conserved Domains (2) summary
      PHA03247
      Location:11991318
      PHA03247; large tegument protein UL36; Provisional
      TIGR00918
      Location:21140
      2A060602; The Eukaryotic (Putative) Sterol Transporter (EST) Family
    2. XM_038654955.1XP_038510883.1  protein patched homolog 1 isoform X1

      UniProtKB/TrEMBL
      A0A8C0LH29, A0A8C0LJQ1, A0A8C0Q3Q4, A0A8I3MSJ2
      Conserved Domains (1) summary
      TIGR00918
      Location:401204
      2A060602; The Eukaryotic (Putative) Sterol Transporter (EST) Family
    3. XM_038654953.1XP_038510881.1  protein patched homolog 1 isoform X1

      UniProtKB/TrEMBL
      A0A8C0LH29, A0A8C0LJQ1, A0A8C0Q3Q4, A0A8I3MSJ2
      Related
      ENSCAFP00845005765.1, ENSCAFT00845007249.1
      Conserved Domains (1) summary
      TIGR00918
      Location:401204
      2A060602; The Eukaryotic (Putative) Sterol Transporter (EST) Family
    4. XM_038654959.1XP_038510887.1  protein patched homolog 1 isoform X5

      UniProtKB/TrEMBL
      A0A8C0Q3B2, A0A8I3MK09, A0A8P0S7D6
      Related
      ENSCAFP00845005801.1, ENSCAFT00845007306.1
      Conserved Domains (2) summary
      PHA03247
      Location:11141233
      PHA03247; large tegument protein UL36; Provisional
      TIGR00918
      Location:11055
      2A060602; The Eukaryotic (Putative) Sterol Transporter (EST) Family
    5. XM_038654957.1XP_038510885.1  protein patched homolog 1 isoform X3

      UniProtKB/TrEMBL
      A0A8C0Q3B2, A0A8C0QIP4, A0A8I3N7F5
      Conserved Domains (2) summary
      PHA03247
      Location:11991318
      PHA03247; large tegument protein UL36; Provisional
      TIGR00918
      Location:21140
      2A060602; The Eukaryotic (Putative) Sterol Transporter (EST) Family
    6. XM_038654961.1XP_038510889.1  protein patched homolog 1 isoform X5

      UniProtKB/TrEMBL
      A0A8C0Q3B2, A0A8I3MK09, A0A8P0S7D6
      Conserved Domains (2) summary
      PHA03247
      Location:11141233
      PHA03247; large tegument protein UL36; Provisional
      TIGR00918
      Location:11055
      2A060602; The Eukaryotic (Putative) Sterol Transporter (EST) Family
    7. XM_038654963.1XP_038510891.1  protein patched homolog 1 isoform X5

      UniProtKB/TrEMBL
      A0A8C0Q3B2, A0A8I3MK09, A0A8P0S7D6
      Conserved Domains (2) summary
      PHA03247
      Location:11141233
      PHA03247; large tegument protein UL36; Provisional
      TIGR00918
      Location:11055
      2A060602; The Eukaryotic (Putative) Sterol Transporter (EST) Family
    8. XM_038654962.1XP_038510890.1  protein patched homolog 1 isoform X5

      UniProtKB/TrEMBL
      A0A8C0Q3B2, A0A8I3MK09, A0A8P0S7D6
      Conserved Domains (2) summary
      PHA03247
      Location:11141233
      PHA03247; large tegument protein UL36; Provisional
      TIGR00918
      Location:11055
      2A060602; The Eukaryotic (Putative) Sterol Transporter (EST) Family
    9. XM_038654960.1XP_038510888.1  protein patched homolog 1 isoform X5

      UniProtKB/TrEMBL
      A0A8C0Q3B2, A0A8I3MK09, A0A8P0S7D6
      Conserved Domains (2) summary
      PHA03247
      Location:11141233
      PHA03247; large tegument protein UL36; Provisional
      TIGR00918
      Location:11055
      2A060602; The Eukaryotic (Putative) Sterol Transporter (EST) Family
    10. XM_038654958.1XP_038510886.1  protein patched homolog 1 isoform X4

      UniProtKB/TrEMBL
      A0A8C0Q3B2
      Conserved Domains (2) summary
      PHA03247
      Location:11591278
      PHA03247; large tegument protein UL36; Provisional
      TIGR00918
      Location:251100
      2A060602; The Eukaryotic (Putative) Sterol Transporter (EST) Family

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049261.1 Alternate UMICH_Zoey_3.1

      Range
      71355076..71425574
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038466169.1XP_038322097.1  protein patched homolog 1 isoform X2

      Conserved Domains (2) summary
      PHA03247
      Location:11991318
      PHA03247; large tegument protein UL36; Provisional
      TIGR00918
      Location:21140
      2A060602; The Eukaryotic (Putative) Sterol Transporter (EST) Family
    2. XM_038466168.1XP_038322096.1  protein patched homolog 1 isoform X1

      Conserved Domains (1) summary
      TIGR00918
      Location:401204
      2A060602; The Eukaryotic (Putative) Sterol Transporter (EST) Family
    3. XM_038466167.1XP_038322095.1  protein patched homolog 1 isoform X1

      Conserved Domains (1) summary
      TIGR00918
      Location:401204
      2A060602; The Eukaryotic (Putative) Sterol Transporter (EST) Family
    4. XM_038466172.1XP_038322100.1  protein patched homolog 1 isoform X5

      Conserved Domains (2) summary
      PHA03247
      Location:11141233
      PHA03247; large tegument protein UL36; Provisional
      TIGR00918
      Location:11055
      2A060602; The Eukaryotic (Putative) Sterol Transporter (EST) Family
    5. XM_038466170.1XP_038322098.1  protein patched homolog 1 isoform X3

      Conserved Domains (2) summary
      PHA03247
      Location:11991318
      PHA03247; large tegument protein UL36; Provisional
      TIGR00918
      Location:21140
      2A060602; The Eukaryotic (Putative) Sterol Transporter (EST) Family
    6. XM_038466174.1XP_038322102.1  protein patched homolog 1 isoform X5

      Conserved Domains (2) summary
      PHA03247
      Location:11141233
      PHA03247; large tegument protein UL36; Provisional
      TIGR00918
      Location:11055
      2A060602; The Eukaryotic (Putative) Sterol Transporter (EST) Family
    7. XM_038466176.1XP_038322104.1  protein patched homolog 1 isoform X5

      Conserved Domains (2) summary
      PHA03247
      Location:11141233
      PHA03247; large tegument protein UL36; Provisional
      TIGR00918
      Location:11055
      2A060602; The Eukaryotic (Putative) Sterol Transporter (EST) Family
    8. XM_038466175.1XP_038322103.1  protein patched homolog 1 isoform X5

      Conserved Domains (2) summary
      PHA03247
      Location:11141233
      PHA03247; large tegument protein UL36; Provisional
      TIGR00918
      Location:11055
      2A060602; The Eukaryotic (Putative) Sterol Transporter (EST) Family
    9. XM_038466173.1XP_038322101.1  protein patched homolog 1 isoform X5

      Conserved Domains (2) summary
      PHA03247
      Location:11141233
      PHA03247; large tegument protein UL36; Provisional
      TIGR00918
      Location:11055
      2A060602; The Eukaryotic (Putative) Sterol Transporter (EST) Family
    10. XM_038466171.1XP_038322099.1  protein patched homolog 1 isoform X4

      Conserved Domains (2) summary
      PHA03247
      Location:11591278
      PHA03247; large tegument protein UL36; Provisional
      TIGR00918
      Location:251100
      2A060602; The Eukaryotic (Putative) Sterol Transporter (EST) Family

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049742.1 Alternate UNSW_CanFamBas_1.0

      Range
      71118402..71189186
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038591157.1XP_038447085.1  protein patched homolog 1 isoform X2

      Conserved Domains (2) summary
      PHA03247
      Location:11991318
      PHA03247; large tegument protein UL36; Provisional
      TIGR00918
      Location:21140
      2A060602; The Eukaryotic (Putative) Sterol Transporter (EST) Family
    2. XM_038591156.1XP_038447084.1  protein patched homolog 1 isoform X1

      Conserved Domains (1) summary
      TIGR00918
      Location:401204
      2A060602; The Eukaryotic (Putative) Sterol Transporter (EST) Family
    3. XM_038591155.1XP_038447083.1  protein patched homolog 1 isoform X1

      Conserved Domains (1) summary
      TIGR00918
      Location:401204
      2A060602; The Eukaryotic (Putative) Sterol Transporter (EST) Family
    4. XM_038591160.1XP_038447088.1  protein patched homolog 1 isoform X5

      Conserved Domains (2) summary
      PHA03247
      Location:11141233
      PHA03247; large tegument protein UL36; Provisional
      TIGR00918
      Location:11055
      2A060602; The Eukaryotic (Putative) Sterol Transporter (EST) Family
    5. XM_038591158.1XP_038447086.1  protein patched homolog 1 isoform X3

      Conserved Domains (2) summary
      PHA03247
      Location:11991318
      PHA03247; large tegument protein UL36; Provisional
      TIGR00918
      Location:21140
      2A060602; The Eukaryotic (Putative) Sterol Transporter (EST) Family
    6. XM_038591162.1XP_038447090.1  protein patched homolog 1 isoform X5

      Conserved Domains (2) summary
      PHA03247
      Location:11141233
      PHA03247; large tegument protein UL36; Provisional
      TIGR00918
      Location:11055
      2A060602; The Eukaryotic (Putative) Sterol Transporter (EST) Family
    7. XM_038591164.1XP_038447092.1  protein patched homolog 1 isoform X5

      Conserved Domains (2) summary
      PHA03247
      Location:11141233
      PHA03247; large tegument protein UL36; Provisional
      TIGR00918
      Location:11055
      2A060602; The Eukaryotic (Putative) Sterol Transporter (EST) Family
    8. XM_038591163.1XP_038447091.1  protein patched homolog 1 isoform X5

      Conserved Domains (2) summary
      PHA03247
      Location:11141233
      PHA03247; large tegument protein UL36; Provisional
      TIGR00918
      Location:11055
      2A060602; The Eukaryotic (Putative) Sterol Transporter (EST) Family
    9. XM_038591161.1XP_038447089.1  protein patched homolog 1 isoform X5

      Conserved Domains (2) summary
      PHA03247
      Location:11141233
      PHA03247; large tegument protein UL36; Provisional
      TIGR00918
      Location:11055
      2A060602; The Eukaryotic (Putative) Sterol Transporter (EST) Family
    10. XM_038591159.1XP_038447087.1  protein patched homolog 1 isoform X4

      Conserved Domains (2) summary
      PHA03247
      Location:11591278
      PHA03247; large tegument protein UL36; Provisional
      TIGR00918
      Location:251100
      2A060602; The Eukaryotic (Putative) Sterol Transporter (EST) Family

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049222.1 Alternate UU_Cfam_GSD_1.0

      Range
      71824991..71895587
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038526858.1XP_038382786.1  protein patched homolog 1 isoform X2

      UniProtKB/TrEMBL
      A0A8C0Q3B2, A0A8C0QIP4, A0A8I3N7F5
      Conserved Domains (2) summary
      PHA03247
      Location:11991318
      PHA03247; large tegument protein UL36; Provisional
      TIGR00918
      Location:21140
      2A060602; The Eukaryotic (Putative) Sterol Transporter (EST) Family
    2. XM_038526857.1XP_038382785.1  protein patched homolog 1 isoform X1

      UniProtKB/TrEMBL
      A0A8C0LH29, A0A8C0LJQ1, A0A8C0Q3Q4, A0A8I3MSJ2
      Conserved Domains (1) summary
      TIGR00918
      Location:401204
      2A060602; The Eukaryotic (Putative) Sterol Transporter (EST) Family
    3. XM_038526856.1XP_038382784.1  protein patched homolog 1 isoform X1

      UniProtKB/TrEMBL
      A0A8C0LH29, A0A8C0LJQ1, A0A8C0Q3Q4, A0A8I3MSJ2
      Conserved Domains (1) summary
      TIGR00918
      Location:401204
      2A060602; The Eukaryotic (Putative) Sterol Transporter (EST) Family
    4. XM_038526861.1XP_038382789.1  protein patched homolog 1 isoform X5

      UniProtKB/TrEMBL
      A0A8C0Q3B2, A0A8I3MK09, A0A8P0S7D6
      Conserved Domains (2) summary
      PHA03247
      Location:11141233
      PHA03247; large tegument protein UL36; Provisional
      TIGR00918
      Location:11055
      2A060602; The Eukaryotic (Putative) Sterol Transporter (EST) Family
    5. XM_038526859.1XP_038382787.1  protein patched homolog 1 isoform X3

      UniProtKB/TrEMBL
      A0A8C0Q3B2, A0A8C0QIP4, A0A8I3N7F5
      Conserved Domains (2) summary
      PHA03247
      Location:11991318
      PHA03247; large tegument protein UL36; Provisional
      TIGR00918
      Location:21140
      2A060602; The Eukaryotic (Putative) Sterol Transporter (EST) Family
    6. XM_038526863.1XP_038382791.1  protein patched homolog 1 isoform X5

      UniProtKB/TrEMBL
      A0A8C0Q3B2, A0A8I3MK09, A0A8P0S7D6
      Conserved Domains (2) summary
      PHA03247
      Location:11141233
      PHA03247; large tegument protein UL36; Provisional
      TIGR00918
      Location:11055
      2A060602; The Eukaryotic (Putative) Sterol Transporter (EST) Family
    7. XM_038526865.1XP_038382793.1  protein patched homolog 1 isoform X5

      UniProtKB/TrEMBL
      A0A8C0Q3B2, A0A8I3MK09, A0A8P0S7D6
      Conserved Domains (2) summary
      PHA03247
      Location:11141233
      PHA03247; large tegument protein UL36; Provisional
      TIGR00918
      Location:11055
      2A060602; The Eukaryotic (Putative) Sterol Transporter (EST) Family
    8. XM_038526864.1XP_038382792.1  protein patched homolog 1 isoform X5

      UniProtKB/TrEMBL
      A0A8C0Q3B2, A0A8I3MK09, A0A8P0S7D6
      Conserved Domains (2) summary
      PHA03247
      Location:11141233
      PHA03247; large tegument protein UL36; Provisional
      TIGR00918
      Location:11055
      2A060602; The Eukaryotic (Putative) Sterol Transporter (EST) Family
    9. XM_038526862.1XP_038382790.1  protein patched homolog 1 isoform X5

      UniProtKB/TrEMBL
      A0A8C0Q3B2, A0A8I3MK09, A0A8P0S7D6
      Conserved Domains (2) summary
      PHA03247
      Location:11141233
      PHA03247; large tegument protein UL36; Provisional
      TIGR00918
      Location:11055
      2A060602; The Eukaryotic (Putative) Sterol Transporter (EST) Family
    10. XM_038526860.1XP_038382788.1  protein patched homolog 1 isoform X4

      UniProtKB/TrEMBL
      A0A8C0Q3B2
      Conserved Domains (2) summary
      PHA03247
      Location:11591278
      PHA03247; large tegument protein UL36; Provisional
      TIGR00918
      Location:251100
      2A060602; The Eukaryotic (Putative) Sterol Transporter (EST) Family

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006583.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      72001309..72071860
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038562996.1XP_038418924.1  protein patched homolog 1 isoform X2

      UniProtKB/TrEMBL
      A0A8C0Q3B2, A0A8C0QIP4, A0A8I3N7F5
      Conserved Domains (2) summary
      PHA03247
      Location:11991318
      PHA03247; large tegument protein UL36; Provisional
      TIGR00918
      Location:21140
      2A060602; The Eukaryotic (Putative) Sterol Transporter (EST) Family
    2. XM_038562947.1XP_038418875.1  protein patched homolog 1 isoform X1

      UniProtKB/TrEMBL
      A0A8C0LH29, A0A8C0LJQ1, A0A8C0Q3Q4, A0A8I3MSJ2
      Conserved Domains (1) summary
      TIGR00918
      Location:401204
      2A060602; The Eukaryotic (Putative) Sterol Transporter (EST) Family
    3. XM_003638871.4XP_003638919.2  protein patched homolog 1 isoform X1

      UniProtKB/TrEMBL
      A0A8C0LH29, A0A8C0LJQ1, A0A8C0Q3Q4, A0A8I3MSJ2
      Conserved Domains (1) summary
      TIGR00918
      Location:401204
      2A060602; The Eukaryotic (Putative) Sterol Transporter (EST) Family
    4. XM_038563188.1XP_038419116.1  protein patched homolog 1 isoform X5

      UniProtKB/TrEMBL
      A0A8C0Q3B2, A0A8I3MK09, A0A8P0S7D6
      Conserved Domains (2) summary
      PHA03247
      Location:11141233
      PHA03247; large tegument protein UL36; Provisional
      TIGR00918
      Location:11055
      2A060602; The Eukaryotic (Putative) Sterol Transporter (EST) Family
    5. XM_038563047.1XP_038418975.1  protein patched homolog 1 isoform X3

      UniProtKB/TrEMBL
      A0A8C0Q3B2, A0A8C0QIP4, A0A8I3N7F5
      Conserved Domains (2) summary
      PHA03247
      Location:11991318
      PHA03247; large tegument protein UL36; Provisional
      TIGR00918
      Location:21140
      2A060602; The Eukaryotic (Putative) Sterol Transporter (EST) Family
    6. XM_038563350.1XP_038419278.1  protein patched homolog 1 isoform X5

      UniProtKB/TrEMBL
      A0A8C0Q3B2, A0A8I3MK09, A0A8P0S7D6
      Conserved Domains (2) summary
      PHA03247
      Location:11141233
      PHA03247; large tegument protein UL36; Provisional
      TIGR00918
      Location:11055
      2A060602; The Eukaryotic (Putative) Sterol Transporter (EST) Family
    7. XM_038563500.1XP_038419428.1  protein patched homolog 1 isoform X5

      UniProtKB/TrEMBL
      A0A8C0Q3B2, A0A8I3MK09, A0A8P0S7D6
      Conserved Domains (2) summary
      PHA03247
      Location:11141233
      PHA03247; large tegument protein UL36; Provisional
      TIGR00918
      Location:11055
      2A060602; The Eukaryotic (Putative) Sterol Transporter (EST) Family
    8. XM_038563433.1XP_038419361.1  protein patched homolog 1 isoform X5

      UniProtKB/TrEMBL
      A0A8C0Q3B2, A0A8I3MK09, A0A8P0S7D6
      Conserved Domains (2) summary
      PHA03247
      Location:11141233
      PHA03247; large tegument protein UL36; Provisional
      TIGR00918
      Location:11055
      2A060602; The Eukaryotic (Putative) Sterol Transporter (EST) Family
    9. XM_038563267.1XP_038419195.1  protein patched homolog 1 isoform X5

      UniProtKB/TrEMBL
      A0A8C0Q3B2, A0A8I3MK09, A0A8P0S7D6
      Conserved Domains (2) summary
      PHA03247
      Location:11141233
      PHA03247; large tegument protein UL36; Provisional
      TIGR00918
      Location:11055
      2A060602; The Eukaryotic (Putative) Sterol Transporter (EST) Family
    10. XM_038563108.1XP_038419036.1  protein patched homolog 1 isoform X4

      UniProtKB/TrEMBL
      A0A8C0Q3B2
      Conserved Domains (2) summary
      PHA03247
      Location:11591278
      PHA03247; large tegument protein UL36; Provisional
      TIGR00918
      Location:251100
      2A060602; The Eukaryotic (Putative) Sterol Transporter (EST) Family