NCBI
 dbSNP
dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
View SNP Submission Batch
Submitter Handle:EGP_SNPS
Submitter Batch ID:MMP16-EGP_YORUB-041105
Submitter Method ID:METHOD-E
Citation:NIEHS Envirommental Genome Project (EGP) - (N01 ES-15478)
Population:EGP_YORUB-PANEL
Comment:The first descriptor in the "Submitter SNP ID:" field indicates the HUGO assigned name of the gene studied. The second number denotes the variant base position in the listed GenBank accession number.
Batch Total SubSNP(ss) Count:427


SubSNP(ss) Submitter
SNP_ID		 SNP
Allele		 Samplesize RefSNP(rs) ss2rs
Orien		 Chr ChrPos Contig
Accession		 Contig
Pos
ss37042935 MMP16-017207 C/T 20 rs28907889 0 8 88311720 NT_008046.17 2597498
ss37042934 MMP16-017189 C/T 20 rs28907888 0 8 88311738 NT_008046.17 2597516
ss37042933 MMP16-017048 C/T 22 rs28907887 0 8 88311879 NT_008046.17 2597657
ss37042932 MMP16-016703 A/G 24 rs28907886 0 8 88312224 NT_008046.17 2598002
ss37042931 MMP16-016614 -/TA 24 rs28907885 0 8 88312314 NT_008046.17 2598092
ss37042930 MMP16-016503 A/G 24 rs2222293 0 8 88312424 NT_008046.17 2598202
ss37042929 MMP16-016497 C/T 24 rs28907884 0 8 88312430 NT_008046.17 2598208
ss37042928 MMP16-016308 C/T 24 rs4463475 1 8 88312619 NT_008046.17 2598397
ss37042927 MMP16-003184 -/A 24 rs28907883 0 8 88325742 NT_008046.17 2611520
ss37042924 MMP16-003137 C/T 22 rs12677541 1 8 88325789 NT_008046.17 2611567
ss37042923 MMP16-003116 G/T 20 rs28907880 0 8 88325810 NT_008046.17 2611588
ss37042922 MMP16-003000 A/G 24 rs7835845 1 8 88325926 NT_008046.17 2611704
ss37042921 MMP16-002815 -/C 24 rs28907878 0 8 88326111 NT_008046.17 2611889
ss37042920 MMP16-002767 C/T 24 rs10092027 1 8 88326159 NT_008046.17 2611937
ss37042919 MMP16-002471 A/G 16 rs28907877 0 8 88326455 NT_008046.17 2612233
ss37042918 MMP16-002141 -/TAC 22 rs28907876 0 8 88326782 NT_008046.17 2612560
ss37042917 MMP16-001584 C/T 22 rs28907875 0 8 88327339 NT_008046.17 2613117
ss37042916 MMP16-001510 C/T 16 rs28907874 0 8 88327413 NT_008046.17 2613191
ss37042915 MMP16-001431 A/C 14 rs7828497 1 8 88327492 NT_008046.17 2613270
ss37042914 MMP16-001065 C/T 24 rs28907873 0 8 88327858 NT_008046.17 2613636
ss37042913 MMP16-000990 C/G 22 rs16892543 1 8 88327933 NT_008046.17 2613711
ss37042912 MMP16-000901 A/G 24 rs3808641 1 8 88328022 NT_008046.17 2613800
ss37042911 MMP16-000895 G/T 24 rs28907872 0 8 88328028 NT_008046.17 2613806
ss37042910 MMP16-000851 A/G 24 rs28907871 0 8 88328072 NT_008046.17 2613850
ss37042909 MMP16-000713 A/C 24 rs28907870 0 8 88328210 NT_008046.17 2613988
ss37042908 MMP16-000236 A/G 24 rs28907869 0 8 88328687 NT_008046.17 2614465
ss37042907 MMP16-000215 C/G 24 rs28907868 0 8 88328708 NT_008046.17 2614486
ss37042906 MMP16-000114 C/G 24 rs13256784 1 8 88328809 NT_008046.17 2614587
ss37042925 MMP16-003176 A/G 24 N.D. N.D.
ss37042926 MMP16-003183 A/C 24 N.D. N.D.
30 of 427 subsnp's starting at ss37042935. ss# starting at ss

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement