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    RUFY3 RUN and FYVE domain containing 3 [ Tyto alba (common barn owl) ]

    Gene ID: 104357417, updated on 12-Mar-2024

    Summary

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    Gene symbol
    RUFY3
    Gene description
    RUN and FYVE domain containing 3
    Locus tag
    N341_02257
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Tyto alba
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Strigiformes; Tytonidae; Tyto
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: Un
    Exon count:
    22
    Annotation release Status Assembly Chr Location
    102 current T.alba_DEE_v4.0 (GCF_018691265.1) Unplaced Scaffold NW_024881297.1 (385919..441601, complement)
    100 previous assembly ASM68720v1 (GCF_000687205.1) Unplaced Scaffold NW_009984900.1 (7629..42192)

    NW_024881297.1Genomic Context describing neighboring genes Neighboring gene MOB kinase activator 1B Neighboring gene G-rich RNA sequence binding factor 1 Neighboring gene UTP3 small subunit processome component Neighboring gene joining chain of multimeric IgA and IgM

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of axonogenesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein RUFY3
    Names
    Protein RUFY3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Tyto alba Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference T.alba_DEE_v4.0

    Genomic

    1. NW_024881297.1 Reference T.alba_DEE_v4.0

      Range
      385919..441601 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_042797073.1 → XP_042653007.1  protein RUFY3 isoform X2

      Conserved Domains (3) summary
      smart00593
      Location:216 → 278
      RUN; domain involved in Ras-like GTPase signaling
      TIGR02169
      Location:325 → 626
      SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
      cd15744
      Location:619 → 668
      FYVE_RUFY3; FYVE-related domain found in RUN and FYVE domain-containing protein 3 (RUFY3) and similar proteins

    2. XM_042797072.1 → XP_042653006.1  protein RUFY3 isoform X1

      Conserved Domains (3) summary
      smart00593
      Location:234 → 296
      RUN; domain involved in Ras-like GTPase signaling
      TIGR02169
      Location:343 → 644
      SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
      cd15744
      Location:637 → 686
      FYVE_RUFY3; FYVE-related domain found in RUN and FYVE domain-containing protein 3 (RUFY3) and similar proteins

    3. XM_042797074.1 → XP_042653008.1  protein RUFY3 isoform X3

      Conserved Domains (3) summary
      TIGR02169
      Location:290 → 591
      SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
      cd15744
      Location:584 → 633
      FYVE_RUFY3; FYVE-related domain found in RUN and FYVE domain-containing protein 3 (RUFY3) and similar proteins
      pfam02759
      Location:121 → 242
      RUN; RUN domain

    4. XM_032985549.2 → XP_032841440.1  protein RUFY3 isoform X3

      Conserved Domains (3) summary
      TIGR02169
      Location:290 → 591
      SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
      cd15744
      Location:584 → 633
      FYVE_RUFY3; FYVE-related domain found in RUN and FYVE domain-containing protein 3 (RUFY3) and similar proteins
      pfam02759
      Location:121 → 242
      RUN; RUN domain

    5. XM_032985550.2 → XP_032841441.1  protein RUFY3 isoform X4

      Conserved Domains (3) summary
      TIGR02169
      Location:272 → 573
      SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
      cd15744
      Location:566 → 615
      FYVE_RUFY3; FYVE-related domain found in RUN and FYVE domain-containing protein 3 (RUFY3) and similar proteins
      pfam02759
      Location:103 → 224
      RUN; RUN domain

    6. XM_042797075.1 → XP_042653009.1  protein RUFY3 isoform X5

      Conserved Domains (2) summary
      smart00593
      Location:234 → 296
      RUN; domain involved in Ras-like GTPase signaling
      TIGR02168
      Location:314 → 516
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type

    7. XM_042797076.1 → XP_042653010.1  protein RUFY3 isoform X6

      Conserved Domains (2) summary
      smart00593
      Location:234 → 296
      RUN; domain involved in Ras-like GTPase signaling
      COG1196
      Location:329 → 538
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

    8. XM_009962836.3 → XP_009961138.1  protein RUFY3 isoform X7

      See identical proteins and their annotated locations for XP_009961138.1

      UniProtKB/TrEMBL
      A0A093EQ60
      Conserved Domains (2) summary
      TIGR02168
      Location:261 → 481
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam02759
      Location:121 → 242
      RUN; RUN domain

    9. XM_009962837.3 → XP_009961139.1  protein RUFY3 isoform X8

      See identical proteins and their annotated locations for XP_009961139.1

      UniProtKB/TrEMBL
      A0A093EQ60
      Conserved Domains (2) summary
      TIGR02168
      Location:243 → 463
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam02759
      Location:103 → 224
      RUN; RUN domain
    Nucleotide Protein
    Heading Accession and Version

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