Data table |
ID |
block |
col |
row |
compugen |
genename |
Plate |
Location |
GB_ACC |
SPOT_ID |
UniGene_ID |
description |
GeneOntology1 |
GeneOntology2 |
GeneOntologyCompugen |
Unigene.Name.Compugen |
Human_prot_simil_id |
Human_simil_descp |
Human_prot_identity |
Mouse_prot_simil_id |
Mouse_simil_descp |
Mouse_prot_identity |
HomoloGene.ID.Human |
HomoloGene.Name.Human |
HomoloGene.ID.Mouse |
HomoloGene.Name.Mouse |
TGI.Name |
Chromosome |
Sequences |
1 |
1 |
1 |
1 |
CGENZEB_456000102_0 |
clone RDS2 retinal degradation slow |
1 |
A12 |
AF210643 |
|
|
"Danio rerio clone RDS2 retinal degradation slow mRNA, partial cds." |
vision [0007601] |
cellular component|integral to membrane|IEA|GO:0016021|ZFIN|na |
vision [0007601] |
"Danio rerio clone RDS2 retinal degradation slow mRNA, partial cds." |
pir:A40308 |
retinal degeneration slow protein - human |
PROTGI=107564; PROTID=pir:A40308; PCT=65.22; ALN=344 |
sp:P15499 |
Peripherin (Retinal degeneration slow protein) [Gene: Rds or Prph2] - |
PROTGI=132213; PROTID=sp:P15499; PCT=65.22; ALN=344 |
Hs.532150 |
"Retinal degeneration, slow" |
Mm.291370 |
"Retinal degeneration, slow (retinitis pigmentosa 7)" |
TC284021 retinal degradation slow |
LG12 |
CACTCGTGCTTTTAATCGCTGTAGATGAAAATCCATTTTTAAGATAATGTTTCACACTGGCGTTCACCTTTAGAAGAATCTACTATGGATGAGATCATGAATGTTGCCAACAAGTTCTTGATTTACTGGAATGGATTACAAATTGAGCCTTGAACGTGCTTTCAGTCTTCGATTTTCGTAAGCCAACTCTGTGGAATTCATCAACCTCTGAAAAGACTTGTTTCTTCTTTCTTTGGACTTTAACCAGTTGTTCAACATGGCTCTCATGAAGGTAAAGTTTGACCTGAAGAAAAGGGTAAAGCTTGCCCAGATGCTATGGCTCATGTACTGGTTTTCCGTAATGGCAGGAGTGCTGGTCTTCAGCATGGGCCTTTTCTTTAAAATCGAACTCCGCAAAAGAAGTGAACTTATGGACAACAACGAAAGCCATTTTGTACCCAACATTCTAATCGGTGTGGGACTTTTGGCATGTTGTCTAAATGCCTTTGGTGGCAAAGTCTGCTACGACTCGCTCGACTCCTCCAAGTATGCGAAATGGAAGTCTATTATGACGCCCTTTCTCATTTGTTGTTTGGTCTTCAACTTCCTCCTTATTGTCACCGCGGCTATGTGTTTCGCCATGCGCATTCCTCTAGAGTTTACACTTGCGGAGGGCCTGAAAAATGGGATGAAGTACTACAAGGACACCGATACACCCGGGCGCTGCTACATGAAGAGGACTCTGGATCTCATGCAGATGGAGTTCCGATGCTGTGGCAACAACAATTACAAAGACTGGTTCGAGATCCAGTGGGTGAGCAACCGTTACCTGGACTTCAGCGCCAAAGAAGTCAAAGACCGAATCAGCAGCAATGTGGATGGCAAATACCTAATGGATGGCGTTCCCTTCAGCTGCTGCAATCCTAGCTCACCACGACCCTGCATCCAACAGCAAATAACCAACAACTCAGCTCACTATAGCTATGACCACTACACCGAAGACCTAAACATCTGGAAACGAGGCTGTCGGGACGCTCTCGTCTCCTACTATGGTGGAATGATGAACACTATTGGGGTGCTTGTGCTGTTGGTCACCCTCCTGCAAAGCGCTGTAATGATTGGACTTCAGTACATAAACACCTCTCTGTCCACACTGGTCAACCCAGAAGACCCCGAGAGCGAGAGCGAGGGCTGGATCCTGGAGAAAACGGTTAAAGAGACCTTCACTGACATCATGGCTAAGATGAAGGCCATGGGCAAAGGCAATCAGGTGGATGAGGGGACGAATGAAGAGGCTGCTGCCACTGCCAGCTGAATGAACTCCGCCAACCAAACTCTGGCCACACTTACCTGAGATAGAGAGCTGTGGGACACAGCCTAAAACTGTAACTATATCACTCACACTACACAAAGTGTAGACAAAGCCAACTAATGAAGAACTGGTGAAGGAAATTAATTCAATTGGTGTTTGACAAACTCATATTAAGGTGATTGGCATGCAATGAGGGGCTTTAAATAGAAAATTATCTGTCCATTTGTAATTATACCAGTTTTGCTTTCCCCTTTTGACTTTGTACTTTGCTACACAAATTTTTGTAGACACTTTTATAGTTATTTTGTTCTATTGATATTTCATATTTGAGTTGATATTCAACCTAAGAATGGCTAGTCAGGGATTGGAATAGTATGAAACTAGCCTCAGTATGAAGAGTATTTATTAAAAAGAAACCCATTTTTCAGGTAAGACAAATAAAAAAAAACACTTTTTACATTTTACGAAAACTAGACAGGTGTCTTTTAAATTTAGAAATGAAACGTGTACATGTGAGAATGATATTTTTGACAGGTGAATTGAAAGACAAAGAGTTAGAAGCTTTAATAAAAAAATAAATAAAATAAAATTATATTTATTTTTGAAGTACCAGGGTTGAGATTTGGGAAAGGGCTATGCAAAAATGAAATGATATTTTGACCTACCTAATGATGAGTGCTCTGTTAGTTCAGCATCAGATAACACACAGTTTCAACCGCGCTGAAAGGAAAGGCTGATTTATGCAGGTTTAGGAGACTAGCAACATATGTGTCCAGAGAGAAGGCCAGGTACAGGGTGAGGGGACGCTTTCGAAGGCCCCAGGAGTTGAGGAGACTGGCAGCTAAACCCTGACCTGCGACTTCTGCATTCCCACTGCTGGGAGCTCCTGTGCTTTTGAAATCTGCACATTTACTCCACAAAATGTCCCAGGCCAGAGACTGAAACTCTATGCTCAAACCTGTAATTTTTTGTAATTATTTTATTTTAATTCTAATTGCGTGTCTATGTAAATAGTGTAGAGTTATTACAAATATATTTTTTCTCTTTTTTTGTAAAAATACAATTCAACTACTTGTAAGATTTTAGGACAGTGTTTGGTGCGTAGTGATTGTTATTGTGAATAAAACTTGTTTAATTGTAAAAAAAAAAAAAAAAAAAAAAAAAA |
2 |
1 |
2 |
1 |
CGENZEB_456000108_0 |
sodium channel protein Scn8a (scn8a) |
1 |
A24 |
AF297658 |
|
10467 |
"Danio rerio sodium channel protein Scn8a (scn8a) mRNA, complete cds." |
sensory perception [0007600] |
molecular function|cation channel activity|IEA|GO:0005261|ZFIN|na//biological process|cation transport|IEA|GO:0006812|ZFIN|na//cellular component|integral to membrane|IEA|GO:0016021|ZFIN|na//molecular function|ion channel activity|IEA|GO:0005216|ZFIN|na//biological process|ion transport|IEA|GO:0006811|ZFIN|na//cellular component|membrane|IEA|GO:0016020|ZFIN|na//biological process|sodium ion transport|IEA|GO:0006814|ZFIN|na//biological process|transport|IEA|GO:0006810|ZFIN|na//molecular function|voltage-gated ion channel activity|IEA|GO:0005244|ZFIN|na//molecular function|voltage-gated sodium channel activity|IEA|GO:0005248|ZFIN|na//cellular component|voltage-gated sodium channel complex|IEA|GO:0001518|ZFIN|na |
sensory perception [0007600] |
"Danio rerio sodium channel protein Scn8a (scn8a) mRNA, complete cds." |
ref:NP_055006.1 |
"sodium channel, voltage gated, type VIII, alpha [Homo sapiens]" |
PROTGI=7657544; PROTID=ref:NP_055006.1; PCT=82.20; ALN=1948 |
ref:NP_035453.1 |
"sodium channel, voltage-gated, type VIII, alpha polypeptide [Mus musculus]" |
PROTGI=6755410; PROTID=ref:NP_035453.1; PCT=82.18; ALN=1948 |
Hs.93485||Hs.124189 |
"MRNA; cDNA DKFZp761D191 (from clone DKFZp761D191)||Sodium channel, voltage gated, type VIII, alpha" |
Mm.142733||Mm.235758 |
"Sodium channel, voltage-gated, type I, alpha polypeptide||Sodium channel, voltage-gated, type VIII, alpha polypeptide" |
"TC274723 UP|Q9DF53 (Q9DF53) Sodium channel protein Scn8a, complete" |
|
CGTGATCCCAACACGACAACTAAAATTAACGCCTTTTATTGTGGAACCGGTGCTACCTATTGGCCGACACTCCCTTACATTTTGCTGGGAGTCATCAATTATGCAGGGTAACGGTGCACACTGAAGGAAGGTAGCAGCAACAATATGGCGACATCCGCAATTTCTTCCGAATTTATTCGACATCTGCAGTCCAGCGAGGATTTTTTGGATACCCGCTAACGCAATCATAAACTGGCTGCCGTGGAGGGTACATAACAGGAGAAGAAGTTGCTGCAGGATGAAAACATGGCTGCACCCCTTCTTGCACCGCCAGGACCTAACAGCTACAAATACTTTACCAGGGAATCACTCCGTGAAATCGAGAAGCGTATCGAGGAGGAGAAAGCCAAGCCGCCACCTAAGCCAGACAACAGCTATCGCGATGATGACGACGAGAACAAGCCCAAACCTAACGGTGACCTGGAGGCGGGCAAGAGTCTGCCCTTCATCTACGGGGACATCCCTCCTGGCATGGTGGCAACACCACTGGAGGATTTCGATCCCTTCTACATAAATCAGAAAACATTTGTAGTCCTAAATAAAGGGAAAACAATCTTCCGCTTTAGTGCCACACCTGCCTTGTACATGATAAGCCCTTTTAATCTTGCTAGACGAATAGCGATTAAAATTTTGATACATTCAGTATTCAGCATGTTCATTATGTGTACGATTTTGACCAACTGTGTGTTCATGACTTTTAGTAATCCTCCCGAGTGGTCCAAACAAGTAGAGTATACTTTCACTGGAATTTATACGTTTGAATCAGCAGTAAAAATCATTGCCCGTGGATTCTGTATAGATGGCTTCACATTCCTTAGAGATCCATGGAACTGGCTGGATTTCATGGTCATCTCAATGGCATATGTAACAGAGTTTGTGGACCTGGGGAATGTATCTGCGCTGAGAACATTCAGAGTTCTCCGAGCATTGAAAACTATCTCTGTCATTCCAGGTCTGAAGACCATTGTTGGCGCTTTGATCCAGTCTGTGAAGAAGCTGTCAGATGTGATGATCCTCACCGTGTTCTGCCTCAGTGTCTTTGCCCTCATTGGTCTGCAGCTCTTCATGGGGAATCTGCGGCAGAAGTGTGTCATCTGGCCCATCAACATCACAGAAATGTTCCCAGACGTCAATGGCAGCCGTGCATTCAACTGGGACGAGTACATCTTGAATGAAACCAATTTCTACTTCCTGCCAGACCAGTTGGATGCACTTTTGTGTGGAAACAGCTCTGATTCAGGTCGCTGTCCTGAAGGTTACACATGCATGAAGGCTGGCCGTAATCCAAACTATGGCTACACCAGCTTTGACAGTTTTGGCTGGGCTTTCCTGGCTCTCTTCCGCCTCATGACGCAGGACTTCTGGGAGAACTTGTACCAGCTGACACTGAGAGCAGCAGGGAAGACCTACATGATTTTCTTTGTGCTGGTCATCTTTGTGGGCTCGTTCTATCTTGTGAATCTGATTCTGGCTGTGGTGGCCATGGCATATGAGGAGCAGAACCAGGCCACCATGGAGGAGGCGGAGCGAAAGGAGGCGGAGTTTAAAGCCATGCTGGAACAGCTGAAGAAACAGCAGGAGGACGCACAGGCAAATGCAATGGCGACGTCAGCGGGAACAGTGTCTGAGGACGTGGTGGAGGATGATGGAGATGGAGAAGGGAATTTGTCCTGCAGCTCGTCTGAGATGTCTAAACTGAGCTCCAAGAGTGCCAAAGAGAGACGCAACCGCAAGAAGAAGTGGCGGCAGAAAGAGCAGGACAAAGAGAAAGGGGACAGCGAGAAGTTTGTCAAATCCGAATCAGACGATGGAAGCAGAAGGAGATTTCGTTTCCCTGATAACCGTTTGGGCCGAAGGAGTTCCATAATGAACCAGTCTTTGCTCAGCATCCCAGGCTCTCCATTCCCTTCGAGGCGCAACAGTAAGAGCAGCATCTTCAGCCGCTGTAAAGACGGAGGCTCTGAGAACGAGTTTGCAGATGATGAGCACAGCACGGTTGAGGAGTACGACGAGCGGCGCGACTCCTTCCTAAGCCCTCAGCGTCGCAGCAGCTACACAGGCTTCTACGGCAAGCGCAACAGCACAGTGGATTGCAATGGAGTGGTGTCTCTCATTGGGCCGGGGCCTGGCGGACGCCTTCTGCCTGAGCCGACCACTGATCTTGAAATTAAGAAGAAACTCTCAGGCTCTCTCATGGTTTCCGTAGAGCAGCTTAACACATCATTCGGGCGCAAGGAGCGAGCAAACAGCGTGATGAGTGCGTTAACCAACACATTGGTTGAAGAACTGGAAGAGTCTCAGAGGAAATGTCCACCCTGCTGGTACAAATTCGCCAACACGTTTCTTATCTGGGAGTGTGGCCCTCTATGGATGTCGATAAAGGAGATTGTGAACCTGATTGTAATGGACCCTTTTGTGGACCTGGCTATCACCATTTGCATTGTGCTGAATACTCTCTTCATGGCCATGGAGCATTACCCGATGACGCCGCAATTTGAGCATGTGCTGTCTGTCGGAAACCTGGTGTTTACTGGAATCTTCACTGCCGAAATGTTTGCCAAACTGGTTGCAATGGACCCATACTACTACTTCCAGGAGGGCTGGAATATATTTGATGGCTTTATTGTGAGCTTGAGTTTGATGGAGTTGGGCTTGGCCAATGTGGAAGGTCTTTCTGTGCTGCGATCATTCCGATTGCTGAGAGTGTTCAAGTTGGCTAAGTCATGGCCCACTCTCAACATGCTGATAAAGATCATCGGTAATTCAGTCGGAGCTTTGGGGAACCTGACCCTGGTGTTGGCCATCATTGTCTTTATCTTTGCTGTTGTCGGCATGCAGTTGTTTGGGAAGAGCTACAAGGACTGTGTGTGCAAGATCGCTCAGGATTGTGAGCTGCCCCGTTGGCACATGAACGACTTCTTTCACTCTTTCCTTATCGTCTTCCGGGTGTTATGCGGAGAGTGGATCGAAACCATGTGGGACTGTATGGAGGTGGCTGGACAGGCCATGTGTCTCATCGTATTCATGATGGTCATGGTTATCGGGAACTTGGTGGTGTTGAATCTCTTCCTTGCCTTGCTGCTGAGCTCATTCAGCGCAGACAACTTGGCTGCTTCCGATGACGATGGTGAGATGAACAACCTGCAGATCGCAGTTATTCGCATTAAGAAGGGAATCGCCTGGGTGAAGGCTAAAGTTCGAGAACTGGTCAACATCATCCTCGGAAGGAAGGTCACAGACGAAGCCAAGCCGCTTGATGACATGTACGACCGTAAACTGAACTGCATTGCCAATCACACAGGTGTGGACATCAGCCGTGACCTGGACTATCAGAAAAATGGCAACGGAACTACCAGTGGCATTGGCAGCAGTGTAGGAAAATACATGATTGACGATGACCACATGTCCTTCATCCACAACCCCAACCTGACAGTATGTGTGCCCATCGCTGTGGGCGAGTCGGACTTTGAGAATCTTAACACTGAAGATTTCAGCAGCGAGTCTGAGGCAGAGGGCAGCAAAGAATTGGATGACATCAGCTCTTCAGAGGGCAGCACCATAGATATTAAACCAGAGGTAGAGGAAGCAGTGGTGGTGGAGACGGTAGAGGAATATGTCGATCCAGAAGCTTGCTGGACTGAAGCTTGTATTGCCCGCTACAAGTGTTGCGATGTGCCCATCACGGAAGGCTGGGGCAAGAATTGGTGGTTTCTCCGAAAGACCTGCTATCTGATTGTGGAGCACAACTGGTTTGAAACCCTCATCATCTTCATGATCCTCCTCAGTAGTGGAGCACTGGCTTTTGAGGATGTGTATATTGAACAGAGGAAGACTATTCGAATCATTCTGGAGTATGCTGACATGGTCTTTACATACATCTTCATATTGGAGATGTTGTTAAAGTGGGTGGCCTATGGTTTTGTCAAGTACTTCACCAATGCTTGGTGCTGGCTGGATTTCTTCATTGTCGACGTGTCTATAGTCAGCCTTATAGCTAATGCGCTGGGCTACTCCGATCTAGGGCCCATTAAATCACTCAGGACACTAAGGGCCCTGAGACCCCTCAGAGCATTGTCACGTTTTGAAGGGATGAGGGTGGTAGTCAACGCCTTGGTGGGTGCCATCCCCTCCATTATGAATGTGTTGCTGGTTTGCCTCATCTTTTGGCTGATTTTCAGTATCATGGGTGTCAATATGTTTGCGGGAAAGTACTACTACTGCTACAACGAAACTGAAAAGGCATACTTTGAGCTAGATGTGGTCAACAACAAATCTGAGTGCTTTGCATTAATTGAGCAAAACTACACTGAGGTGCGTTGGAAGAACGTCAAAATCAACTTTGACAACGTGGGTGCTGGTTACCTGGCTCTTCTGCAAGTGGCAACCTTTAAAGGATGGATGGACATCATGTATGCAGCAGTTGACTCACGAAGGGTGGAAGACCAGCCGAAGTATGAAGACAATATCTACATGTATATCTATTTTGTCATCTTCATTATATTTGGCTCTTTCTTCACCCTCAATCTCTTCATTGGTGTGATTATTGATAACTTCAACCAGCAGAAGAAAAAGTTTGGAGGTCAGGATATCTTCATGACTGAGGAACAGAAAAAGTACTACAATGCAATGAAAAAGCTTGGCTCAAAGAAACCTCAGAAGCCCATACCCAGACCCCAGAACAAGCTCCAGGGTATGGTGTTTGACTTTGTGACACAGCAGGTCTTTGATATTTCCATCATGATCCTCATCTGTTTGAACATGGTCACCATGATGGTTGAGACAGATGATCAATCACAGGAGACGGAAAACATTCTGTACTGGATCAACTTCATCTTTATTGTGGCCTTCACTTCAGAGTTTGTCCTGAAGCTCTTTGCGCTGCGTCATTATTACTTCACCAATGGCTGGAACATCTTTGACTGCGTTGTGGTCATTCTCTCTATCGTTGGTATGTTCCTGGCTGATCTGATTGAGAAGTACTTTGTGTCACCAACATTGTTCAGGGTAATCCGTCTGGCTCGAATTGGACGTATTTTGCGTCTGATCAAAGGAGCAAAGGGCATTCGGACTTTACTGTTTGCCTTGATGATGTCACTGCCGGCCCTGTTCAATATTGGCCTTTTGCTGTTCTTGGTTATGTTCATTTTCTCTATTTTTGGCATGTCAAACTTTGCCTACGTGAAGCGGGAGTCTGGCATAGATGACATGTATAACTTTGAAACATTTGGCAATAGCATGATCTGCCTGTTCATGATAACCACCTCAGCCGGATGGGACGGCCTTCTCGCTCCCATTCTCAACTACCCGCCAGATTGTGAGCCAACTAAAGAAAATCCAGGTACTAGTGTTAAAGGTAACTGTGGAAACCCTTCGGTGGGCATCTTCTTCTTTGTCATGTATATTATTGTCTCGTTCCTCATCGTGGTGAACATGTACATCGCCATTATTCTGGAGAACTTTAGCGTCGCCACAGAGGAGAGTGCTGACCCTCTTTGCGAAGACGACTTTGAGTCCTTCTATGAGATCTGGGAAAAGTTTGATCCTACTGCCTCCCAGTTTATCACTTTTGCCAAGCTGGGTGATTTCGCCGACACTTTGGAGCACCCACTACGTGTTCCTAAGCCCAACACTATAGAGCTGATCGCCATGGACCTGCCAATGGTGAGCGGCGACCGCATTCACTGCCTAGACATCCTGTTTGCATTCACCAAACGCGTGCTGGGTGATAGCGGCGACCTGGACATGATGCGGCAACAGATGGAGGAGCGTTTTATTGCTGCCAATCCTTCCAAAGTGTCTTTTGAGCCCATCACTACCACCCTGCGCCGCAAACAGGAGCATATGTCTGCTGGAGTCATCCAGCGTGCTTTCCGTGCCCATCTGATTCGGAAAGGCTTCATCTGCAAGCGTTTACTCAGCAGCAGCAGGCTGGAGAATGGTGGTACTAATCAGGACAAGAAAGAGGGCACACCTTCTACTGCCTCACTGCCATCCTACGACAGTGTGACCAAACCTGAGAAGGAGAAGTTGGAGGAGAGTGACAGTAAGGGCAAAAAGGGCAAAAACCAAAAAGATGTCAAGGAATCCAAGTTTTAGGAACGATGGACACTGTCTAGTTGAGACTTAAACTATCTATTCCAACAAAATGTATAGAAGAAAATTTGCAACAAAAAACACTGATATCTTTGAGCAAAACAGTTGTTTACATACAACAAATGCACCGGTGCAACAGGAAAGCAGCTTGGTTTTTACAAGATTCAATGATGACCAAACCAACTTATGAGCTTACTGTCTTACATTTTGTGCTAAGTGACCAAGATTTTACTGTTCCAACTGCGGCCAAAAGGCACTTACAAGGACAAACTAAATAACAATCCATGGCAGAAATCTTTGATAGGGACCACCTGCCAATGGACAAACTAGTACAAAGCAAGCTCATAAGATGGCTTCCTTTGCACTCACATGTGTGTGGAGTTCAGCATTCCTCCGCTACGGACATCCCGTTCAAACACTACACTGCCGAAATCCGACGGAAACCTCCCACTCATCCCAGGAGGATTCTGGGACTTTGTATTTTAACCATAGGAGAACCAATAATAATGATGTTAACTCAATCATGTGGAGTGTCTGCCGAAAAAAACAAACAAAAAAAACAGAACATTATGCAAGGGTTTTCAGTTGTTGTGATGAATATTTCACCTTATTTGATCCACAGAAAGTAGGGGAAAACGTTCAGCCCATTCATCTCGTCATCATCTCTTTGTTATAATAAAAA |
3 |
1 |
3 |
1 |
CGENZEB_456000114_0 |
metallothionein A. |
1 |
C12 |
X97278 |
|
4229 |
D.rerio mRNA for metallothionein A. |
heavy metal sensitivity/resistance [0009634] |
molecular function|metal ion binding|IEA|GO:0046872|ZFIN|na |
heavy metal sensitivity/resistance [0009634] |
D.rerio mRNA for metallothionein A. |
sp:Q93083 |
Metallothionein-IR (MT-1R) [Gene: MT1R] - Homo sapiens (Human) |
PROTGI=2497864; PROTID=sp:Q93083; PCT=66.67; ALN=59 |
sp:P02802 |
Metallothionein-I (MT-I) [Gene: Mt1] - Mus musculus (Mouse) |
PROTGI=127383; PROTID=sp:P02802; PCT=63.33; ALN=59 |
Hs.333806 |
Metallothionein M |
Mm.147226 |
Metallothionein 2 |
"TC301083 UP|MT_BRARE (P52722) Metallothionein (MT), complete" |
|
ATGGATCCTTGCGAATGCGCCAAGACTGGAGCTTGCAACTGTGGTGCCACCTGCAAGTGCACCAATTGCCAGTGTACAACCTGCAAGAAGAGTTGCTGTTCTTGTTGCCCGTCTGGTTGCAGCAAGTGCGCCTCTGGCTGCGTGTGTAAGGGCAATTCCTGCGGGACCAGCTGTTGTCAGTGAGGAGGTCAACGTGATGTTTTGTTACAACAATGTGAACTTGTTCGTCTGTGCTGGGCGTCTTCGCTTTTCCATCGCATGAATGTTTTATTTTTACATGATTCTAATAAACGACCTCCCTGTTGTTCT |
4 |
1 |
4 |
1 |
CGENZEB_456000120_0 |
histidine-rich protein KE4 (ke4) |
1 |
C24 |
AF196345 |
|
|
"Danio rerio histidine-rich protein KE4 (ke4) mRNA, partial cds." |
chromatin silencing at ribosomal DNA (rDNA) [0000183] |
cellular component|integral to membrane|IEA|GO:0016021|ZFIN|na//cellular component|membrane|IEA|GO:0016020|ZFIN|na//biological process|metal ion transport|IEA|GO:0030001|ZFIN|na//molecular function|metal ion transporter activity|IEA|GO:0046873|ZFIN|na//biological process|transport|IEA|GO:0006810|ZFIN|na |
chromatin silencing at ribosomal DNA (rDNA) [0000183] |
"Danio rerio histidine-rich protein KE4 (ke4) mRNA, partial cds." |
sp:Q92504 |
Zinc transporter SLC39A7 (Solute carrier family 39 member 7) |
PROTGI=12643344; PROTID=sp:Q92504; PCT=52.75; ALN=421 |
sp:Q31125 |
Zinc transporter SLC39A7 (Solute carrier family 39 member 7) |
PROTGI=12643401; PROTID=sp:Q31125; PCT=51.94; ALN=434 |
Hs.278721 |
"Solute carrier family 39 (zinc transporter), member 7" |
Mm.18556||Mm.320863 |
"Solute carrier family 39 (zinc transporter), member 7||CDNA clone IMAGE:6834466, partial cds" |
"TC293437 UP|Q7T1M5 (Q7T1M5) Zinc transporter, complete" |
LG19 |
AATCAAATGTGTTGACTGAATGCCACGTCGGTTTGAGTGTGAGCAGCATCTTAACTGCTTTCACTCTTTACCAGAATAAGCTAATTTTTATTAGTTTTCGCAGCTTATACCGTTGCTAGACGTGGATGCGGTTAGCAGATTGCTAACTTATTTAGTGCACGGTACTGGCGCGTGCTTTGGCTTTTTCGGCATCACTAGCAGGAACAATGAGGGTCTTTAGCAAATCGCTATTGCTGATTGCTGTTGGCATTTTAATGTCCCAGCAGACACTGGCTCACTCCCACCATCATCATGGACATGGTGATGGTGGATGCCATGGTCACTCACATGGTGGAGCGAAGATGCATCACGGGGCAAGCAAATGGAGTGCTGAAGCTAATCTGCCTCATGCTGAAGAGGAGCATCACGTACACGATCACGGGCACACACATGATCATGCACACGATCACGGGCATGCACACAGTCATGGAGACATTCATGATCATGGACATGCACACAAGCATGGACACGCACACGATCATGGAGCTGAGAAATCGAAGAAAGTTGTGGAAGCAGGCAAACGGAACATGGTGGAGCTCTGGATGCAGGCCATTGGAGCCACCCTGCTCATTAGTGCTGCACCATTTCTGATACTCTTCCTCATTCCAGTACAGTCAAACACTGACCAGCACCAGGACCTGCTTAAAGTGCTCTTGAGTTTTGCATCTGGTGGTTTGCTTGGAGATGCATTCCTTCATCTCATTCCTCATGCACTGGAACCTCATTCTCATCACAGTCAGCCACACAGCGAGGAGTCCCATGGCCAGTCGCATGGTGAGGAGTCACATGGTCACTCTCATGGAGCTGCCCATGGTCACATGATGTCAGTTGGTCTGTGGGTGCTAGGTGGCATTGTTGCATTTCTAGTGGTTGAGAAATTTGTTCGTCTTTTGAAAGGAGGACATTCACACTCGCATTCCCACTCTCCCTCTGCTCCAAAGTCAAAGGATAGTGATGAAGAAGATGACAAGAAAGGACAAAAGAAGGGAGAGAAAGACAAAGTTGTCTCTCAACAGAAACCTACAAAGAAAACAGTAGAGACAAGTTCTGATATTAAAGTGTCTGGTTATCTGAACCTGGCTGCTGATTTCACTCACAATTTCACGGATGGTCTTGCAATTGGAGCATCTTTCCTGGTTGGTCCAGCTGTTGGTGCTGTTACCACCATCACCATCCTCTTACATGAAGTACCACATGAAATTGGAGACTTTGCAATTCTTGTCCAATCAGGCTGCACCAAGAGGAAGGCTATGTGTCTTCAGCTTCTCACTGCTGTTGGTGCATTAGCTGGAACTGCCTGCTCCTTATTGGCTGAAGGAGTGGGTGACGCGGCCACAGCGTGGATCCTCCCCTTTACTGCCGGAGGCTTTGTTTACATTGCGACTGTCACAGTTCTCCCAGAGCTGCTGGCTGGACACTCTAGTTTCTGGCAGTCACTCCTGGAGATCCTGGCTCTTCTGTTTGGAGTGGGAATGATGGTGCTGATTGCAGAGTATGAGTGAGCGAGGAAGCCATGTTTAAAGGAAGAACTTGGAATATGAGGCGCAGTGACCAATGTATGGTCACCGGAAGCGCAGAGAAACTTTGAAATGTATGTTAGCATTGACCACAGGAGGAAAACCTGCGTAAGAAATAAAAAAAGTGCTTTTATGAGAAAACTACTCATTTATGCAAAGACCTGCATGAATGGATCACATGAAACAACCTCACCAGGGACCAAAATTTAGATCTAATACATGCATACAAATCATAGGTATACACTAAAGAGACTGATAGAATCAGAATGTGCGGACCATTACGTTCCAAAGTTACTATGTCTCCAGTCACTAAAACATGTTTTGCTAATCAATTTATTTGCTTATCAAGAAATTGCAGTAATGTTTTGATTTGAAAAATCATTTGACTGCACTTCACGCAATAAAGAAGTATGTGATTCTTTCTAAAAAAAAAAAAAAAAA |
5 |
1 |
5 |
1 |
CGENZEB_456000126_0 |
isolate LC1_4 immunoglobulin light chain |
1 |
E12 |
AF246189 |
|
|
"Danio rerio isolate LC1_4 immunoglobulin light chain mRNA, partial cds." |
immune response [0006955] |
|
immune response [0006955] |
"Danio rerio isolate LC1_4 immunoglobulin light chain mRNA, partial cds." |
pir:S41816 |
Ig kappa chain V region L25 - human |
PROTGI=542878; PROTID=pir:S41816; PCT=51.43; ALN=105 |
prf:1513205B |
|
PROTGI=226453; PROTID=prf:1513205B; PCT=45.30; ALN=117 |
Hs.546671||Hs.548684||Hs.548717 |
"Similar to Ig kappa variable region||Immunoglobulin kappa light chain VJ region (ID KPOLYC13)||Cell-type T-cell immunoglobulin gamma chain, V region (IGHV@)" |
Mm.359413 |
RIKEN cDNA 2810409K11 gene |
TC273686 immunoglobulin light chain |
|
TGCTGTGGCTCTGGACTTGAGACTGAGAGCAGAACAAACACAATCTTCATCATCATCATCATCATCATCATCATCACAGCAGACTCAACTACAGCTATGATCAACATCTGCATCTGCATCTGGACTCTGACTCTCTGCATTCAGGAGAATTGGGGACAAGTGACAGTGACTCAGAGTCCAGCAGTGAAATCCATCACACAAGGAGAAACTCTGATCATCAGCTGCAAAACCAGTCAGCCCATTTCTGGCTGTAGTGAATGTGTGTCCTGGTATCAGCAGAAACCTGGAGAAGCTCCTAAACTCCTGATTTACGGGATCAACAGTCGTTACTTAAACACTCCATCTAGATTCAGTGGCGGTGGAACAGCAAGTATTGGAAAAGATTTTACTCTGACCATCAGTGGAGTCCAGACTGAAGATGCTGGAGATTATTACTGTCAGAGTGTTCACTATATCAGTAATAGTTGGGTGTTCACATTCGGTGGAGGAACCAAACTGCTGATCTCAACTGGTTCCCCAGTGAAGCCCTCAGTGTCTCTGCTCGGCTCCTCTTCTCTGCAGAGCTCTGGAGACTCGGCCGCTCTGTTCTGTTTGCTCAGCTCTTACTCTCCACCGGGGGCGAAGGTGACCTGGACACGGGACGGCTCTGAGCTCAGCGAGGGGTTCCTGACCAGTGCAGAGAGCCAGCAGGAGGCCGCTCAGCTGCACAGCGTCCTGAGCTCAGAGAGAGAATGGAGAGCGAGACGCTCGTTGTAATCCTCTGCTGAGTGTCAGAGTCCGTCCCAGTGCGATCGGGGTGGGTAAGGTGGGGTGGTTTAAGCTGTGTCTCCCCAAAAAAAAAAAAAAAAGCGTGCAGTGGCGGCTAAATAAAAACCACTCCTCTAAAT |
6 |
1 |
6 |
1 |
CGENZEB_456000132_0 |
isolate LC1_7 immunoglobulin light chain |
1 |
E24 |
AF246193 |
|
10687 |
"Danio rerio isolate LC1_7 immunoglobulin light chain mRNA, complete cds." |
immune response [0006955] |
|
immune response [0006955] |
"Danio rerio isolate LC1_7 immunoglobulin light chain mRNA, complete cds." |
pdb:1FH5 |
|
PROTGI=10835838; PROTID=pdb:1FH5; PCT=43.54; ALN=206 |
pdb:1EGJ |
|
PROTGI=13399900; PROTID=pdb:1EGJ; PCT=44.98; ALN=206 |
|
|
|
|
"TC273687 GB|AAG31729.1|11139496|AF246193 immunoglobulin light chain {Danio rerio;} , complete" |
|
GGGCTTGGTTGGGCTACTGGCACTGTGGTACACATTCGGTGGAGGAACCAAACTGCTGATCTCAACTGGTTCCCCAGTGAAGCCCTCAGTGTCTCTGCTCGGCTCCTCTTCTCTGCAGAGCTCTGGAGACTCGGCCGCTCTGCTCTGCCTGCTCAGCTCTTACTCTCCACCGGGGGCGAAGGTGAGCTGGACACGGGACGGCTCTGAGCTCAGCGAGGGGTTCCTGACCAGTGCAGAGAGCCAGCAGGACGGCCGCTACAGCTGCACCAGCGTCCTGAAGCTCAAGAGAGAAGAATGGGAGAAGCGAGAGCGCTGCGCCTGCAGAGTCACTCATGCTGGAGGTGATCAGGAGATCCCGTTCCCCAAGTGCTGATCTGTGTGTGTGTGTGTGTGTGTGTGTTTCAATAAAGCCTGTTGTTCTTCTGCTCCACACGTGTCTGACAGCATCCTTCACTCACTCATGCAGATCTGCTCGGTCTCCACTGGAGAATCAGCACACGTTCACACTGCTGGAGTAAATGACTCTGAGTTGTTGCAGCTTCTTCATTCGTGTGTTTTTCCTCAAAGTCTCGTTTCACTTTGCTTCACACTAGAACATTCCAGCAGTCCTGACTGTGCTCCAGAAAGAAATGGCATTGACACAGAGTCCAGATGGAGTTGAGTATTGAGCCGCTGAATATATCTGCTCCTCTAGAAAACTCTCTGCTTGACCCTGAGATCAGAGGAGAGTCTTGCTGTGGAGCGACCTGATCAAGTCCTGTCGTCTGCTGCAGCTACATCACAAATGAGCTCAGATTAGAGTTTGACTCAGCTGAGATCAA |
7 |
1 |
7 |
1 |
CGENZEB_456000138_0 |
novel immune-type receptor 3.2 (nitr3.2) |
1 |
G12 |
AF318399 |
|
17712 |
"Danio rerio novel immune-type receptor 3.2 (nitr3.2) mRNA, complete cds." |
immune response [0006955] |
|
immune response [0006955] |
"Danio rerio novel immune-type receptor 3.2 (nitr3.2) mRNA, complete cds." |
pdb:1FVD |
|
PROTGI=442919; PROTID=pdb:1FVD; PCT=29.86; ALN=218 |
pdb:1H8O |
|
PROTGI=15825889; PROTID=pdb:1H8O; PCT=28.45; ALN=220 |
Hs.390427||Hs.397460||Hs.434749||Hs.439896||Hs.449605||Hs.449606||Hs.449607||Hs.449619||Hs.474119||Hs.512133||Hs.531191||Hs.535594||Hs.535614||Hs.536551||Hs.537333||Hs.538034||Hs.540601||Hs.541997||Hs.542078||Hs.542381||Hs.542412||Hs.547216||Hs.547544||Hs.547545||Hs.547547||Hs.548728||Hs.548752||Hs.550412 |
"Immunoglobulin kappa variable 1D-13||Ig kappa light chain variable region (V-J),subgroup I (clone C8)||Anti-oxidized LDL immunoglobulin light chain variable region||(clone WR4.12VL) anti-thyroid peroxidase monoclonal autoantibody IgK chain, V region.||Antibody light chain variable region to HIV-1 gp120 (339bp)||Ig germline kappa-chain gene Vk3 region, 13k04||Ig germline kappa-chain gene Vk3 region, 13k11 and 13k12||Immunoglobulin light chain||Similar to Ig kappa chain||Cationic anti-DNA autoantibody||Transcribed locus, moderately similar to XP_515609.1 similar to [Human Ig rearranged gamma chain mRNA, V-J-C region and complete cds.], gene product [Pan troglodytes]||Variable region of immunoglobulin kappa light chain, clone LD2-18-VL||Transcribed locus, moderately similar to XP_515744.1 similar to immunoglobulin kappa light chain VC region [Pan troglodytes]||Rearranged Ig kappa-chain (Vk1/Jk5)||Clone S12G10K myosin-reactive immunoglobulin light chain variable region mRNA, partial cds||Clone BSYN50 immunoglobulin variable region VL kappa domain mRNA, partial cds||Clone 003.6A2L immunoglobulin light chain variable region mRNA, partial cds||MRNA fragment.||Immunoglobulin kappa chain, V-region (SPK.7)||Isolate donor N clone N200K immunoglobulin kappa light chain variable region mRNA, partial cds||Fab fragment binding syncytial glycoprotein F mRNA.||Immunoglobulin kappa light chain variable region (IGKV gene), isolate B-CLL 483||MCLL071 immunoglobulin light chain variable region||BL Ly91 mRNA for abnormal Ig kappa light chain (4)||Immunoglobulin kappa light chain VJ region (ID LAM024)||Transcribed locus||1b11 mRNA for kappa-immunoglobulin light chain variable region||Clone BSYN49 immunoglobulin variable region VL kappa domain mRNA, partial cds" |
Mm.246335||Mm.304149||Mm.305097||Mm.320975||Mm.321286||Mm.321287||Mm.321289||Mm.321294||Mm.333109||Mm.333110||Mm.333111||Mm.333114||Mm.333116||Mm.333117||Mm.333119||Mm.333120||Mm.333126||Mm.333127||Mm.333140||Mm.335607||Mm.347447||Mm.347642||Mm.348271||Mm.349280||Mm.359243||Mm.359389||Mm.359393||Mm.359660||Mm.360305||Mm.360306||Mm.360498||Mm.360504||Mm.362029||Mm.362057||Mm.365124||Mm.370122||Mm.371792 |
"Immunoglobulin kappa chain variable 34 (V34)||Gene model 1069, (NCBI)||Similar to V(kappa) gene product||Immunoglobulin kappa chain complex variable region||Gene model 1408, (NCBI)||Similar to immunoglobulin light chain variable region||Gene model 1077, (NCBI)||Similar to immunoglobulin light chain variable region||Similar to immunoglobulin light chain variable region||Ig active kappa-chain VJ2C mRNA from plasmacytoma MOPC 173B||Similar to IG KAPPA CHAIN V-V REGION L6 PRECURSOR||Similar to Ig kappa light chain precursor||Similar to Ig V-K167 precursor||Immunoglobulin kappa chain variable 8 (V8)||Similar to immunoglobulin light chain variable region||Similar to immunoglobulin light chain variable region||Gene model 459, (NCBI)||Similar to immunoglobulin light chain variable region||Similar to immunoglobulin light chain||Gene model 1524, (NCBI)||Anti-DNA antibody Ig kappa chain mRNA, V-J region, hybridoma 104.57||Similar to [Human Ig rearranged gamma chain mRNA, V-J-C region and complete cds.], gene product||IgG kappa light chain variable region||Immunoglobulin kappa chain complex variable region||Similar to Mitochondrial outer membrane protein 25 (NPW16)||Similar to Ig kappa chain V region (C8.5) - mouse (fragment)||Similar to Ig kappa chain precursor V region (L7) - mouse||Similar to immunoglobulin light chain variable region||DNA segment, Chr 6, Massachusetts Institute of Technology 97||Monoclonal antibody NP48 light chain variable region||Immunoglobulin light chain variable region (IgK)||Imunoglobulin gamma-3 kappa chain precursor||Anti-human melanoma immunoglobulin light chain V region||Immunoglobulin rearranged kappa-chain (OK1) mRNA V region||Immunoglobulin light chain variable region (IGLV gene), clone D15||IgG kappa light chain variable region||Similar to immunoglobulin light chain variable region" |
"TC282944 UP|Q90Z88 (Q90Z88) Novel immune-type receptor 3.2 (SI:dZ213M14.1), complete" |
|
ATGAGCTTACAAGGTTGTTTTACCTTCTTTCTCCTCACATTTGCATATGGGACCTGTGAAGAAGATTTTATTCATCAGCAGCCACTGGTAGTTGCTGAACTTGGAAGCCGTGTGACTTTACCCTGTTTTCACTCTGATGACTATGTAACTACTGTTTCATGGACTAAACATTCATCTGGCAAGAAACCACTTCTTATAGCATATTCAGATTTCAACTCAGAAAGAGTTACATATCAAAATGCCTTCAACAACACTAATCGATTCTTTATCACAATTGCAAGTGGCTGTTATAATTTAACTATCCTTCACTTGGAGAAAGAAGATTTTGCAAATTACTATTGTGTTAAGGATTTCTTGAACAGGTTAATGTTTGGAGAAGGAACGATTCTGCTGCGCAAAGAAACTGACAGAATTAGCAGCACGTCTGTTATCCAGCAGCCTGTGTCTGACAGACTTCATCCAGGAGATTCAGTGACCCTGCAGTGTTCGGTCAGCAGTCACATCTGTGCTGGACATTACAGAGTCTACTGGTTTAAACACTCATCAGGATATTCTCAACCAGGGATCATTTACACTCATGATAACCGGAGCGATCAGTGTTTGAAAAGTTCAGAGAAGAGCTCTTTTGTTCAGAGTTGTGTTTATAGTCTCTCTCAGACTGAACTCACTACATCTGATGCTGGAGTTTATTACTGTGCCGTTGACACATGTGGGAAGATACACTTTGGAAATGGGACCAAGTTGACTATTGAAGCTTCCTTCTTTTGGAATCCAGTTGCTGTCATCCTGTTTACAATAAGTGTAACATCCATTGTTGTGAACATAGTTTTGGTGATTCAAAAGAATCGGAGAAAAGAAACTACAGAACATCTCAGAAGCCAGATAAATCAGATTGAAACAGATGACCTAAATTATGCTGCCCTGCACTTTTCCAAAACAAAGCCAACCACCTCGAGAAGATCTTCAATGAAAACCATCCAGGAAACCATTTATTCAGAGACCACAGTACATTAG |
8 |
1 |
8 |
1 |
CGENZEB_456000144_0 |
CC chemokine CCL1 (CCL1) |
1 |
G24 |
AF201450 |
|
8113 |
"Danio rerio CC chemokine CCL1 (CCL1) mRNA, complete cds." |
immune response [0006955] |
molecular function|chemokine activity|IEA|GO:0008009|ZFIN|na//cellular component|extracellular region|IEA|GO:0005576|ZFIN|na//biological process|immune response|IEA|GO:0006955|ZFIN|na |
immune response [0006955] |
"Danio rerio CC chemokine CCL1 (CCL1) mRNA, complete cds." |
|
|
|
ref:NP_035466.1 |
chemokine (C-C motif) ligand 27 [Mus musculus] |
PROTGI=6755428; PROTID=ref:NP_035466.1; PCT=31.33; ALN=77 |
Hs.459590 |
Chemokine (C-C motif) ligand 27 |
Mm.6660||Mm.373540 |
"Transcribed locus, strongly similar to NP_035466.1 chemokine (C-C motif) ligand 27 [Mus musculus]||Chemokine (C-C motif) ligand 27" |
"TC274732 UP|Q9PTF8 (Q9PTF8) CC chemokine CCL1, complete" |
LG22 |
NAAAGAGCGGGTGTTTCTGANCNGGGATCCCCGNCAGCTATCTCCCCCTCCCCCGGGTGGAAAATTGATGGGCCCGCGGCCGTTCTAGAAGTACTCTCGAGTTTTTTTTTTTTTTTTTTTCAAACTGAAACAAGTGTTTATTAGTTGATAATAGAGCGTAACACACACAGTATATCGCCACACACACTGTTTGAAGCATCAGCTGGAAACATTTCATGATTACTTTTATATAAAAATAAACAGATTTAAAGACATAAAATGTAGATGAAGAGTCCTGAAGCCGTCTGTATCCGTGATTTCAGCCTGGAGCTCTTTCCTTTAAGGCTTTTTAGGTTTGCGCTTCACCATTTTCTTCAAGAATCTCTCCAGTTTGGGATGAGCACAGATTTTCTTCCCCTTGAAGTGTAATATTAGAGCCTTAATCTCACAGTGTCCAGATGTGTCCTGGACCTCGTATCTTCTGACCGATCGCAGTACACGTTTAGGGATTCTGCGTAAAACACTCAGACAGCATGTTGGAATGGCTGCACCTTTGTTGTCGGTGAGGATGATTATGGTAAAT |
9 |
1 |
9 |
1 |
CGENZEB_456000150_0 |
beta-thymosin |
1 |
I12 |
AF006831 |
|
19380 |
"Danio rerio beta-thymosin mRNA, complete cds." |
immune response [0006955] |
|
immune response [0006955] |
"Danio rerio beta-thymosin mRNA, complete cds." |
ref:NP_066926.1 |
"thymosin, beta 10 [Homo sapiens]" |
PROTGI=10863895; PROTID=ref:NP_066926.1; PCT=78.57; ALN=42 |
pir:A37217 |
thymosin beta-4 - mouse |
PROTGI=111143; PROTID=pir:A37217; PCT=77.27; ALN=43 |
|
|
|
|
"TC281837 GB|AAD42010.1|5326587|AF006831 beta-thymosin {Danio rerio;} , complete" |
|
NNCCCGGCTGTGGCTCTGGAGACCTGCTGCTCCTCCACACAAGCACACAGCCTGACACTTTCTCTTTCAGCACTCCAGCCCATTCACTGCTTTACGCTCAAAAAAACATGGCCGACAAACCCAACATGACTGAAATTACATCCTTTGATAAAACTAAACTCAGAAAGACAGAGACCCAAGAAAAGAACCCTTTGCCAACCAAAGAAACTATTGAACAGGAGAGACAAGGAGAGTCCACACCGTGAATGACGTCTGTAACACAGCAGAAAGTGAAGACCAGAGACTTCAGACGAACTCAAGCACTCACTAATGTGTCTTTTTTTATAACTTAGATTGTCCGTTTAAGAACTAAATCAAATGTGAGAATGTATTTCACCCTGTGAGTTCAGAAAACCAAATAAAATGCACCTCATTTTTGACACAAAAAAAAAAAAAAAAAAAAAAGGCCACATGTGCTCGAGCTGCAGGTCGCGGCCGCTAGACTAGTCTAGAGAAAAAACCTCCCACACCTCCCCCTGAACCTGAAACATAAAATGAATGCAATTGTTGTTGTTAACTTGTTTATTGCAGCTTATAATGGTTACAAATAAAGCAATAGCATCACAAATTTCACAAATAAAGCATTTTTTTCACTGCATTCTAGTTGTGGTTTGTCCAAACTCATCAATGTATCTTATCATGTCTGGATCCCCGGGTACCGAGCTCGAATTAATTCCTCTTCCGCTTCCTCGCTCACTGACTCGCTGCGCTCGGTCGTTCGGCTGCGGCGAGCGTATCAGCTCACTCAAAGGCGGTATACGGTATCACAG |
10 |
1 |
10 |
1 |
CGENZEB_456000156_0 |
clone ODare-Tpsn-C5o tapasin |
1 |
I24 |
AF137538 |
|
8062 |
"Danio rerio clone ODare-Tpsn-C5o tapasin mRNA, complete cds." |
immune response [0006955] |
"biological process|antigen processing, endogenous antigen via MHC class I|IEA|GO:0019885|ZFIN|na//cellular component|membrane|IEA|GO:0016020|ZFIN|na" |
immune response [0006955] |
"Danio rerio clone ODare-Tpsn-C5o tapasin mRNA, complete cds." |
sp:O15533 |
Tapasin precursor (TPSN) (TPN) (TAP-binding protein) (TAP-associated |
PROTGI=12643361; PROTID=sp:O15533; PCT=30.77; ALN=402 |
sp:Q9R233 |
Tapasin precursor (TPSN) (TPN) (TAP-binding protein) (TAP-associated |
PROTGI=12643364; PROTID=sp:Q9R233; PCT=30.70; ALN=402 |
Hs.370937 |
TAP binding protein (tapasin) |
Mm.154457||Mm.328964 |
"TAP binding protein||Transcribed locus, strongly similar to NP_033344.1 TAP binding protein [Mus musculus]" |
"TC281694 UP|Q9W7A9 (Q9W7A9) Tapasin (SI:dZ179B20.6), complete" |
|
CTGTACATTTTGGGGAAAACCGACAGATCTCTGTTCACACACATTTGTAAACGCCGAATGTGTGCATTTAAACGTACAAATGAACGATGTCTGATATTTCGACCGTATTCAAGATATCTGTCATCGCTTTTACATTGTTTTACGGTTCTTGTGGTTCTGGATGTCCGGTTCTGGAGTGCTGGTTTGTACAAGAGAAGCCTGGTCATGGAGGAGGTTTATCAACCCCAATGAGTCAAGAGAAATCTCTCATATTTATCAGGACTGAAGCCTACAGTGAAGAAATAAAGACTGAACTGCATCCTCCTGCAGACATCAGCTCATCCAGAGTTTACTATGTGACTGATCCAGCAGGGACGTTCTGCAGTGCTGCTCTGAATCCTCCTAAAGGCTCAGTGAATAAACCCAAATGTGAGATTAACCCCTTCATGCCTCACGCCTCCATGGTCAGATGGGCTTCTGCTCTCACTGACTCCGCCCAGAGTCCAGTCTACCTGCAAGCTGATTGGTTTTCAGTGGCAGCACAAGGCCTTGATGACCAGCTGACACTGTCCAATATTATGAGAGCACCTTCAGCTTCTAAAGAACCAAAAGTGATCCTCAGTGTGTCCAGCAAAACTCCAGTGGTTCGCTGTAGACTGGGAGAGCCGGTTCTGCTGGACTGTGGCTTCTGGATTGATCCATCTTCTCCTCTTCACGGGTCTGGATTCTCCATCGAGTGGCGTTATCAGTTCAGGGGTGAAGGACGGCTGGTGCTCGCTTACGACGGCAAGAACGATCGCTTTGCAGAGACGTCAGAGAGCGGAGCTGAAATGGACATCACAGGCCTCTATCAAACAGGCAACGCTTCTCTGATCCTGGAGGAATCTCAAGTCAGACACTCGGGAACTTACATCTGCACAGTTTACCTTCCTCATCTGCTGGCACAGGTGGCTGTGGACCTGGAGATTGTTGAGCCTCCATCTCTCTCCATCCTCCCCTCTCCTCTTCCTCTGCTGGTCCCGGGACAGGTGCTGTCGGTTCAGTGTGAGGCGTCTGGTTTTGCTCCTCACACTCTGGATCTGGGCTGGGAGTTCACCGGGGCTGATGGGAAGTCCCTCTCTCTGGGTCAGGGCAGTGTAACGGGTCACAGACGGGCGTCTGATGGCACCTTCAGTCAGAGCAGCCGTCTGGAGCTGGACTCCACTAAACTGAGACTCGCTCGGGGCGGAGAGATCAGCTGTGTGGCCAAACATGACGGAGGAACACGACGAGCCTCTGCTGCACTCAATGTCATTGGTGTTGCAGCTCCGTCTATTGAGGACTCGATGGCGATGGTTGCTGTTGCTCTTCTTCTTTATGGCATGATCAAGTTTCTCTCCTGGACATTCAGCTCTTCTGACTCTGGTGACTCTGAATTAAATGATAAGAAGGAGAAATAAACCTGGATCTGGGATTTTTCATCTTGCCTCAAGCTCTCTGTGAAGCAGTTTTTATTGTTTTTATTGCTGTTTTTATTGTTCTCCTGAAAAGTCGTCTGAACAATTTACAGTAAAATGTTTGTAAATAATCAGATTGACATTAGGATTTTTAGACTGCTGTATCTGTGTTTAGGATGCTTTCTCTGTGTTGTAGTATTTTATATAGACTGATTTTATTGCTGGGTGTACAGATGCTGAAAATAAAAATATTAAACATACATTTATGATTGTTTAAAAA |
11 |
1 |
11 |
1 |
CGENZEB_456000162_0 |
isolate 24_10 T-cell receptor alpha variable region gene |
1 |
K12 |
AF246170 |
|
|
"Danio rerio isolate 24_10 T-cell receptor alpha variable region gene, partial cds." |
immune response [0006955] |
|
immune response [0006955] |
"Danio rerio isolate 24_10 T-cell receptor alpha variable region gene, partial cds., product = T-cell receptor alpha variable region, location = <1..>309, protein_id = AAG31706.1, codon_start = 1, db_xref = GI:11139450, name = CDS" |
|
|
|
|
|
|
|
|
|
|
"TC296771 GB|CAD59086.1|26984600|AL591674 SI:dZ40G1.21 (TCR-alpha V segment I-19 (according to annotation by Tatsuya Ota)) {Danio rerio;} , complete" |
|
ATGAAACTTCATTCACTCATTCTCTTCTGTGCCTCAGCTGCTTCAGTCTTTGGAAGTGATATCAAACCAAACATCACAGATGTTGTTTATGAGGAGGGTTCAGATGGTACAATATTCTGCAGTCATTATCCTGGAGCAGCAGATAATATCTTCTGGTACCGTCAGTATGGAGGATCAAAACCTGAATTTTTGCTTGCTACCTATGGCAGTGCAAAAGACACTGAAAAATCTAAAGTAGACCCAAGATTCTCTGTTAAGATTGAAAAAAAGGAACAAAACCATGCAGATCTGAAGATCTCCTCTGCTGCAGTATCAGACTCTGCTGTGTATTACTGCGCTCTGAGGCCC |
12 |
1 |
12 |
1 |
CGENZEB_456000168_0 |
paracaspase |
1 |
K24 |
AF316598 |
|
10705 |
"Danio rerio paracaspase mRNA, complete cds." |
immune response [0006955] |
molecular function|caspase activity|IEA|GO:0030693|ZFIN|na//molecular function|protein binding|IEA|GO:0005515|ZFIN|na//biological process|proteolysis and peptidolysis|IEA|GO:0006508|ZFIN|na//biological process|signal transduction|IEA|GO:0007165|ZFIN|na |
immune response [0006955] |
"Danio rerio paracaspase mRNA, complete cds." |
ref:NP_006776.1 |
mucosa associated lymphoid tissue lymphoma translocation protein 1 isoform a [Homo sapiens] |
PROTGI=5803078; PROTID=ref:NP_006776.1; PCT=44.04; ALN=794 |
pir:S18252 |
heparan sulfate proteoglycan - mouse |
PROTGI=110801; PROTID=pir:S18252; PCT=25.65; ALN=219 |
|
|
|
|
"TC273872 UP|Q9DDL2 (Q9DDL2) Paracaspase, complete" |
LG22 |
GTTTACCATACTGATTTGCGAACTCGCTACATCAATCGAGCAAATCTGATTTAAGTTGATTTTAGCGGTTATTCCGATTCTGATCGATTGCTTATTGGTAACTCGTTTGAAATACCTAAAGAGCTTCTTGGAATATATTTCACTGCGTCCATTGACAGGTTACATTTGTAAGCGAAGGATAATTTCACTTCCTGGAGTCTAAATTGCTGTAAAACAGATAATTCCTAACAAGCTATGGAGGACAAGAATTTGGGGTTAGAAAACATAAGTGAGGCAGCACTTAGTAGACTTGGTTACATGCTAGACAATGCAGAGTGTGGCTGGAAACAGCTGGCAAAGGCAGTGGCTGAGCAGCCACAGTTCTGCTATAGTGACAGAGAGATGACCGACTGCTCACTCAAAGTGCTAAGTCCACATGGCAGTCCTGGCAGATACCTGCTTGCCCTCCTTGCGGATAGAGGCTGTACGTTGGCTTTCCTGCTTCAGTGCCTGAAGAAAATCGAGCACCGAGAGGCTGTTGGATTTCTCACTATGAATGTCATGGAGCAGATTGACATCATACAGCAGCCACAGAGTCAGCGGATAGCAGAGGGGAGTCCTGTGGTTCTGAGCTGCAAAGCAGTCGGTCCTGTAGAGCTCCAATACCAGTGGTTCAAGGGCAAAGATGAGATGCCAGAAGGTAACAGCCCAGATTTGGTGTTTAATCGTGCAAGTCCAGCACAACAGGGGTACTACATCTGTCGTGTAAGTTCTGGAGACAAGTACATCTTCTCCAACTGGGCTCATGTATATCTGCTGAGGTCTGGAGGTGCGAGTGCAGATTCCAGCAGCAGCTACTTCCCTTCAACAGCTAGTGGGTTGAATATAACACAACAACCCAGGCCTCAAGCGTTAATGGAGGGAGACACGCTCTGTCTTGAATGTTCTGCCCAGGCCAACCCGCCTCCACAGTTCCAGTGGTATTTTAACAAAGAACTTATGCCAAAGTGCATAAGAAACTTCTTAAAGATTCCATGCATAACAACAGCTGACAGAGGTATTTATGCCTGCAGAGTTTACAACCTTTATCACGAAATGTGGAGTGATCAGGTCCAAGTAAACATTGGTCCTGGTTCCTGTTCGGAAAGCTCATGGGAAAAAACTGCAGTAGATAATCCTGAGGCGAATCTAAAGCAAATGGGTGATTGTTGCGCCACTGATAAGGTAGCACTACTTATTGGGAACATGAATTACCTGCATCATCGGCAGCTGAGAGCTCCTATGGCGGATGTTCACGAGCTGACTAACCTTCTACGCCAGCTAGATTTTAAAGTGGTTTCTCTGCTGGATCTCAACTGGCAGGAGATGCATAGCGCTGTTACTGAGTTCCTGCTGCTGTTGGATCGAGGAGTTTATGGCCTGTTGTATTTTGCTGGTCATGGTTATGAGAACTATGGGAACAGTTTTATGGTACCCATTGATGCTCCAGCCTCCTACACCTTCAAGCATTGTCTGTGGGTGCAGGAAGTGTTACAGCGGATGCAAGAACGCCAGACAGGACTTAACGTCTTTCTGCTGGACATGTGTCGAAAACGAAACCCAAACGATGAGGGCATCCCACAACCGGACCCCTTGAGAGTGACAGCAAACATAGTGTTTGGCTATGCTACGTGTGTTGATGCTGAAGCATTTGAAGTAAATAAAGACGATCTCTCTAATGGAATCTTCATGAGCTTCCTGAAGAAAAGACTAATGGAGCCAGAGAAGGTCACGGTCATACTTGACAAAGTAGCAGAAGACATGGGAAGGTGTGAAATCACTCGTGGTCGGCAGGCTCTGGAGCTCCGTAGTAATCTATCAGAGCGGCGTGCTTTGACAGACAAAATTCAGGCTCCAGCATGCCAAATCGCAGCATCAACACGGAATTTACAGTGGGCCATTGCACATGTCCTCCCAGAGAGCCGCTGTCTTCAGTTTGAATGTGGTGTCACGGTGCAGCTCGGTTTTGCTGCAGAGTTTTCCAATATCATGATAATCTACACTCAGATATTGGAGACTCCAACAGACATTGTGTCCTGCTCTGCTCAGCTTTCTGATTTTACTGAGGGCCCTGAAGTTGACCTGAAGCGCAGCAATCAGGAGAGTCTCCACGAGGCTGAAAGCTTCCTGCTGACCATAGATGATCTACTGCCTCTGAAACAACCTCAGCTCTTCACTCGTATTAGTGCCCTGCAGAGACTCAAGAAAGAACTCTCCTTTACTGTGTGTCTACACTACAAGTATGGTAATCTGGATGAAGAGCTCCTGGAAGAGAAAAGGATCACTGTGGGAAAACCTCTAGTGTCCAAACTCAATCTCCACGAGCCACGGCTCTTTCACAGTTCCTCCTCTGATCAACAAATGTCCAGTTTTTTGGACTCTTCATCCTTCAGCGAAAGCTTCAGAGCTAACCTGCCTGACCTAAAACAAAATTTCATTGGTTCTGCATCTACATCCTTGCCCAACTATCGGGTACCAATGGAATCATTTGCATGCTTTGGTTTGAAGAACGAACCGGAGGAAACATTATGTCCAGAGTTTCTTGAGTCTGAAGAACCTCCCGCCATTAAGAGTTTACCCAGTGCTTCTTCTGAGGAACTGCCATTTAAATTTAGCAACTTTCAAAATTCCATTTAGCAGTAAAGTGTTACCCGAGATCTATTACAAACTGTGAATGTGTTGCAGTATCATTTTGTTGTATTCCCGCACCTTCCTTATGTTACACAGACATGATGAGAATGTAATGTGTATGTGCTGTTAATATTTACATTATGGTATTATTGAAAAGTCAACCAACCAGTGCATTAAATTATATAGTTATAAAAAAAAAAAAAAA |
13 |
1 |
13 |
1 |
CGENZEB_456000174_0 |
heat shock protein hsp90alpha |
1 |
M12 |
AF068773 |
|
610 |
"Danio rerio heat shock protein hsp90alpha mRNA, complete cds." |
response to heat [0009408] |
molecular function|ATP binding|IEA|GO:0005524|ZFIN|na//molecular function|nitric-oxide synthase regulator activity|ISS|GO:0030235|ZFIN|na//biological process|positive regulation of nitric oxide biosynthesis|ISS|GO:0045429|ZFIN|na//molecular function|protein binding|ISS|GO:0005515|ZFIN|na//biological process|protein folding|IEA|GO:0006457|ZFIN|na//biological process|response to unfolded protein|IEA|GO:0006986|ZFIN|na//molecular function|unfolded protein binding|IEA|GO:0051082|ZFIN|na |
DNA damage response [0006974] |
"Danio rerio heat shock protein hsp90alpha mRNA, complete cds." |
ref:NP_005339.1 |
"heat shock 90kDa protein 1, alpha [Homo sapiens]" |
PROTGI=13129150; PROTID=ref:NP_005339.1; PCT=85.11; ALN=726 |
sp:P07901 |
Heat shock protein HSP 90-alpha (HSP 86) (Tumor specific |
PROTGI=1170384; PROTID=sp:P07901; PCT=84.86; ALN=726 |
Hsp83||Hs.408190||Hs.439502||Hs.509736||Hs.523560||Hs.525600 |
"The structural gene for the 83,000 dalton heat-shock protein (HSP83). During development, the gene is expressed at high levels in the absence of heat shock in many tissues, especially ovaries where it apparently originates in nurse cells (Zimmerman, Petri, and Meselson, 1983). During heat shock, however, the expression level is only raised several fold (Xiao and Lis, 1989). Deletion of sequences upstream from the coding region eliminates normal developmental expression and results in regulation of Hsp83 in a manner similar to that of Hsp70 which is activated only in response to heat shock.. ||Similar to Heat shock protein HSP 90-beta (HSP 84)||Transcribed locus, strongly similar to NP_034610.1 heat shock protein 1, alpha [Mus musculus]||Heat shock 90kDa protein 1, beta||Heat shock 90kDa protein 1, alpha-like 3||Heat shock 90kDa protein 1, alpha" |
Mm.2180||Mm.261775||Mm.303050||Mm.359279||Mm.371565 |
"Heat shock protein 1, beta||Mus musculus, clone IMAGE:4973251, mRNA||Heat shock protein 90-like mRNA, partial sequence||Similar to heat shock protein 1, alpha; heat shock protein 86||Heat shock protein 1, alpha" |
"TC291501 UP|HS9A_BRARE (Q90474) Heat shock protein HSP 90-alpha, complete" |
LG20 |
AGACCCGCGACGAGAAGACTGGAGTACAACACCTCCAAACACAAAACCACTGCAAAGACTTTCTGCACTCGAGACGACCACACAGCAAGATGCCTGAGAAGTCGGCCCAGCCCGTGATGGAGGAGGAGGTGGAGACGTTTGCGTTTCAGGCTGAGATCGCTCAGCTCATGTCTCTGATCATCAACACCTTCTACTCCAACAAGGAGATCTTCCTCCGAGAGCTCATCTCCAACTCCTCTGATGCATTGGACAAGATCAGATATGAGAGCTTGACAGATCCGAGCAAACTGGATTCATGCAAGGACTTAAAGATCGAACTGATCCCAGACCAGAAAGAGCGCACGCTGACCATCATCGACACCGGCATCGGCATGACCAAAGCCGACCTGATCAACAATCTGGGCACCATCGCTAAATCCGGCACAAAGGCCTTCATGGAGGCTCTGCAGGCCGGAGCGGACATTTCTATGATCGGTCAGTTCGGTGTGGGCTTTTATTCTGCGTATCTGGTGGCCGAGAAAGTGACGGTCATCACCAAACACAACGATGATGAGCAGTACATTTGGGAATCTGCAGCTGGCGGATCGTTCACTGTCAAGCCAGACTTCGGTGAATCAATTGGACGTGGTACCAAAGTCATTCTCCACCTTAAAGAGGATCAGTCTGAATATGTGGAGGAAAAGCGCATTAAGGAAGTGGTGAAGAAGCACTCTCAGTTCATCGGTTACCCAATTACGTTTTACATTGAGAAACAGAGAGAAAAAGAGGTGGATCTTGAGGAAGGCGAGAAACAGGAGGAGGAGGAGGTTGCAGCAGGCGAAGACAAAGACAAACCCAAAATTGAAGATCTGGGAGCTGATGAAGATGAAGACTCTAAGGATGGCAAGAATAAGAGGAAGAAGAAGGTGAAGGAAAAGTACATTGATGCCCAGGAGCTGAATAAGACCAAGCCGATCTGGACCCGGAACCCCGATGACATCACCAATGACGAGTACGGCGAGTTTTACAAGAGTTTAAGCAATGACTGGGAGGATCACTTGGCTGTCAAGCATTTCTCAGTTGAGGGCCAACTGGAGTTTCGCGCTCTACTTTTTGTACCCAGAAGAGCTGCTTTTGACCTTTTTGAGAACAAGAAGAAGAGAAACAACATTAAGTTATACGTGCGCAGGGTTTTCATCATGGACAATTGCGAGGAACTCATTCCAGAATATCTCAACTTTATTAAGGGTGTGGTGGACTCTGAGGATCTGCCTCTGAACATCTCCAGAGAAATGCTTCAACAGAGTAAAATCCTGAAGGTGATCCGCAAAAACCTGGTCAAGAAGTGTCTCGATCTCTTCACCGAACTGGCAGAGGATAAAGACAACTACAAGAAATACTACGAGCAGTTCTCCAAAAACATCAAGCTTGGCATCCATGAGGACTCTCGGAATCGCAAGAAACTTTCTGATCTTTTGCGCTACTACACTTCAGCTTCAGGAGATGAGATGGTGTCACTTAAAGACTATGTGTCTCGCATGAAGGACACACAGAAGCACATCTACTACATCACCGGTGAGACCAAAGATCAGGTGGCGAACTCAGCGTTTGTGGAGCGCCTCCGTAAAGCTGGTCTGGAGGTGATCTACATGATCGAGCCCATCGATGAATACTGTGTTCAGCAGCTGAAGGAATATGATGGCAAAAATCTGGTGTCGGTCACTAAAGAAGGCCTGGAGCTGCCCGAGGATGAAGAGGAGAAGAAGAAGCAGGATGAGCTGAAGGCCAAATATGAGAACTTGTGCAAGATCATGAAGGACATCCTCGACAAAAAGATTGAGAAGGTCACCGTCTCCAACCGTCTGGTGTCTTCGCCCTGCTGTATCGTCACCAGCACATACGGCTGGACGGCAAACATGGAGAGGATCATGAAGTCTCAGGCTCTGAGGGATAACTCTACCATGGGCTACATGACCGCTAAAAAGCACCTGGAAATCAACCCAGCGCACCCCATCGTGGAGACCCTCAGAGAGAAAGCGGAAGCCGACAAAAACGACAAGGCGGTGAAGGATCTGGTGATCCTGCTGTTCGAGACTGCGCTCTTATCCTCAGGCTTCACACTGGACGACCCACAGACTCATGCAAACCGCATCTACAGGATGATCAAACTCGGACTTGGCATCGATGACGATGACTCTGTGGTCGAGGAAATCTCTCAACCCGCTGAAGAAGATATGCCCGTTCTGGAGGGAGACGACGACACTTCGAGAATGGAGGAAGTCGACTAAAGAGTTTTAGTGTACAAATAAAATCCATAATGTAATGTAATTTATTGTTTTTGTATAAAACAATCCAGACATCCCACAGTGAATGTTAGCTACTTTAAAGTCCTTGTAATTGCCTTGTGTGTCTGCTCTTGCATTTTATAATTCAAACTTTCTTTTTGTAAACCTAAGCTGAACGTTTTTAATAAATGACTCCTTATAAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
14 |
1 |
14 |
1 |
CGENZEB_456000180_0 |
D204 |
1 |
M24 |
AB055678 |
|
19940 |
"Danio rerio D204 mRNA, partial cds." |
signal transduction [0007165] |
|
signal transduction [0007165] |
"Danio rerio D204 mRNA, partial cds." |
pir:T47133 |
hypothetical protein DKFZp761P19121.1 - human (fragment) |
PROTGI=11360266; PROTID=pir:T47133; PCT=72.04; ALN=93 |
pir:JC4975 |
plexin 2 precursor - mouse |
PROTGI=2137645; PROTID=pir:JC4975; PCT=69.89; ALN=93 |
Hs.511454||Hs.548929 |
Plexin A4||Transcribed locus |
Mm.242174||Mm.357936 |
"Plexin A4||Transcribed locus, strongly similar to NP_786926.1 plexin A4 [Mus musculus]" |
TC294195 plexinA2 [Danio rerio] |
|
CAAGGACATTCCCAGCTACAAAAGCTGGGTGGAGAGATACTACTCCGACATTAGTAAGATGCCGGCCATCAGTGACCAGGATATGAATGCATATCTGGCAGAGCAGTCCCGCATGCACATGAATGAGTTCAACACCATGAGCTCCCTCAGCGAGATCTACTCTTACATTGGCAAATATACAGAGGAGATTGTGTCTGCACTAGAGCAGGATGATGGTGCCAGGAAACAGAGACTGGCCTGTAAGCTGGAGCAGGTGGTCGCCTTCATGAGCCTGGAGAGCTGAGAACCACATTTCCCAGAGTGCACTGGGAGATCCATCAGAAACCAAGCCGTGCCTGAGTGAAGACCTATCCATCTATCTCATCTCTTCTGTTTGCAATCTTCCCACAAAAAAAGTGTTTGCATCATATTAGTTCTGCTTCCTAGAAGAGTAGAGATGGGAACTGGATGGTGGGTGGAGGAGCCAAGGACTACATTACCCATGATGCAGTAGAGTGGGTGGCCATCCAGCTCTGCTGTGTAGAGAAGGGGTGGCTGCCTATGAGTTCCACTTCACTGCATCCTCCATCCTTCTCCCTGACT |
15 |
1 |
15 |
1 |
CGENZEB_456000186_0 |
Eph-like kinase 1 (zek1) |
1 |
O12 |
U89295 |
|
536 |
"Danio rerio Eph-like kinase 1 (zek1) mRNA, complete cds." |
transmembrane receptor protein tyrosine kinase signaling pathway [0007169] |
molecular function|ATP binding|IEA|GO:0005524|ZFIN|na//molecular function|ephrin receptor activity|IEA|GO:0005003|ZFIN|na//cellular component|integral to membrane|IEA|GO:0016021|ZFIN|na//molecular function|kinase activity|IEA|GO:0016301|ZFIN|na//cellular component|membrane|IEA|GO:0016020|ZFIN|na//biological process|protein amino acid phosphorylation|IEA|GO:0006468|ZFIN|na//molecular function|protein kinase activity|IEA|GO:0004672|ZFIN|na//molecular function|protein-tyrosine kinase activity|IEA|GO:0004713|ZFIN|na//molecular function|receptor activity|IEA|GO:0004872|ZFIN|na//molecular function|transferase activity|IEA|GO:0016740|ZFIN|na//biological process|transmembrane receptor protein tyrosine kinase signaling pathway|IEA|GO:0007169|ZFIN|na |
signal transduction [0007165] |
"Danio rerio Eph-like kinase 1 (zek1) mRNA, complete cds." |
sp:P54764 |
Ephrin type-A receptor 4 precursor (EC 2.7.1.112) (Tyrosine-protein |
PROTGI=1711371; PROTID=sp:P54764; PCT=64.02; ALN=964 |
sp:Q03137 |
Ephrin type-A receptor 4 precursor (EC 2.7.1.112) (Tyrosine-protein |
PROTGI=585374; PROTID=sp:Q03137; PCT=63.88; ALN=978 |
Hs.479853 |
EPH receptor A5 |
Mm.137991 |
Eph receptor A5 |
"TC271722 UP|EPA3_BRARE (O13146) Ephrin type-A receptor 3 precursor (Tyrosine-protein kinase receptor ZEK1) (EPH-like kinase 1) , complete" |
LG20 |
GGTCGGATCCTGCTTCAAACAGGCGCGCAGTTTCCTCTCCAGCTCAGCTCAGTTCTCCAGCGCAGCCACCGGCTCATCAGCCCAAGTTTACGCACAGGGATGCGGGCGCGTGGAGCCGCCTGAAAATGGCTCTCTTTAGGATTTACTCTTTCCTTGCTCCTTTTCACATACTAGTGCTGTGTCAAGCCTTGAGGAATTATCCAGATAATGAAGTTACCCTGCTTGACTCCATGTCCGCCCCAGGTGATCTGGGTTGGGAAGCGTATCCATCAGAGGGGTGGGAGGAGATTAGTGTTATGGATGAGAGGAACATACCTATGAGGACTTACCAGGTATGCAACGTAATGGAAGCCAATCAGAACAACTGGTTGCGTACTGGACTGATTCAACGAGAAGGTGCTCAGCGCGTCTATGTGGAGATCAAATTTACTCTGCGTGACTGCAACAGCCTGCCGGGAGTCCCTGGAACCTGTAAGGAGACGTTTAACGTGTACTACCACGAATCCAACAATGCAGTTGCCGCACCTTTGCGGCACATTCGTGAGAGCCAGTACATAAAGATCGACACTATAGCAGCTGATGAGAGCTTCACACAGACAGACGTTGGGGATCGTGTCATGAAGTTAAACACAGAAGTACGAGATATCAGTGGCCTCAGTAAGAGAGGCTTGTATCTGGCATTTCAGGACCTGGGTGCTTGCATTGCTCTGGTGTCGGTGAGAGTCTTTTATAAACGCTGTCCGTTGGCGGTGCTCAATCTGGCTCGGTTTCCAGACACAGTGACGGGTGGTGATTCAGCGCTGGTGGAAGTGCGTGGGACTTGTGTGGAAGATGCAGAAGAGCTGGAGGGACCACGGATGTTTTGCAGCGCAGACGGAGGTTGGCTGGTGCCCATCGGCCGCTGTGTTTGCAGGCCAGGTTTCGAGGAAGTGGATGGACACTGTCAACCATGTCGGTCAGGCTTCTACAAGGCCTCAGCTATGGATGCGTACTGTGTCAAGTGTCCTCCACACAGCTACTCTCACCAGGACAAGGCCTCTGAGTGTGTATGTGAACGAGGTTTCTATCGAGCAGAATCAGACCCTCGCTCTATGGCCTGCACAAGACCACCTTCAGCACCAGGAAACCCGATTTCGATGGTGAACGAGACAGCGGTGACTCTGGAATGGAGTCCTCCCCGAGACAGTGGTGGACGTGGAGATGTCAGCTATAGTGTTCACTGCAGAAAGTGCTCTGGCGAAACAGGGGCGTCAGAGAGGTGTGTTCCCTGTGGCAGCGGCGCACACTTCAACCCCAGACAGTTCGGCTTGACGCACCCCAGAGTTCTGGTCACTGAACTGCAGCCACACACCAATTACACCTTCAGCGTTGAAGCCCTGAATGGAGTCTCAGATCTGAGCCCCAGTCCACGTCAGCTGGTGTCTGTCAACGTCACCACCAGTCAGACAGTGAGCGTCATCTTAAAGGAAAGGAAGGGCACTGATAGTGTGACGCTGGCATGGCAGGGTCCAGAACCTGTTGACGGGACCGTGGTGGAATATGAAGTCACCTATTATGAAAAGAACCAGCAGGATCAGAACTACACTGTCCTCAAGACAAAATCCAACAGCATGACGGTGGACGGGCTTAAACCGGGAACTACATACATCTTCCGGGTTCGAGCACGTACTGATGGAGGATATGGGAACTATAAGGGAGAGATTGAGTTGGAGACGAGCCACGAGGACATGCTGGCAGTCGGAGATCCAAACCAGCAAACCATACTGGCTATTTCAGTGGCCGGCGGTGCAGTTCTCCTGGTCCTGCTTGTGGCCTGCTTCATTGTTAGTGGACGGCGCTGTGGATATATTAAAGCAAAGCAAGACCCTGAGGAGGAGAAAATGCAGTTTCAGCATGGACGAGTCAAACTTCCTGAAACCCGTACGTACATTCACCCCCATACATATGAAGACCCGAACCAGGCAGTGCGAGACTTCGCCAAAGAGATTGAAGTCTCCAACATTCGGATTGAAAGAGTCATTGGGGCTGGTGAGTTCGGCGAGGTCTGCAGTGGCCGTCTGCGTCTGCCCAGTAAAAGAGAGATCCAGGTGGCCATCAAGAGTCTGAAAGCTGGATATTCAGAACACCAGAGACGCGACTTTCTGAGCGAGGCCAGCATTATGGGCCAGTTTGACCACCCTAACATCATTCGACTGGAAGGAGTTGTCACCAGATGTAAGCCTGTGATGATAGTGACAGAGTACATGGAAAATGGATCTCTGGACACTTTTTTGAAGAAACACGACGGGCAGTTCACAGTGATCCAGCTGTTGGGAATGCTGAGAGGGATCGCCGCCGGGATGCAGTACCTCTCCGAGATGAACTACGTGCATCGGGATTTGGCAGCACGGAACATTCTGGTAAACAGAAACCTGGTGTGTAAAGTGTCTGACTTCGGGCTGTCGCGCGTGCTGGAGGACGATCCTGAAGCGGCATACACTACACGGGGTGGAAAGATTCCCATTCGCTGGACGGCTCCAGAGGCCATCACTTACAGGAAGTTTACCTCAGCCAGTGATGTATGGAGTTACGGCATTGTCATGTGGGAGGTGATATCCTATGGGGAGCGACCGTACTGGGAAATGTCCAATCAGGATGTGATAAAAGCTGTAGATGAAGGCTACAGGCTTCCAGCCCCGATGGATTGTCCGGTGGTGCTTCACCAGCTCATGCTTGACTGCTGGGAAAAGAACCGCAGCGATCGGCCTAAATTCGGGCAGATTGTCAACACTCTGGACAGGCTGATCCGAAATCCCAGCAGCCTAAAGCAGCTGGCCAACAGTGCGGTCTGGGAGGATCCAGTGACTCCTGAGGCGGCGGTCAACACAGTTGAAGACTGGCTGGACTTGATTAAAATGGGTCAGTACAAAGAACACTTCTCCAGCGCCGGCTACGTTACCCTGGACTCAGTTCTGTATGTCAGCAGCAGTGAATTGGACAAGATGGGTGTTGAGCTGGCAGGACATCAGAAGAAGATCCTGTCCAGCATCCAGTGTCTTCAGGCACATCACGGGACTCAAGTTCAGGTATAGCGGCTCACCTCACTGCTCTCGACCCGCTTCCACAGAGGAGACCGGAAGTCATCGATCTTGCCAAACGGAAGCGTCTTGCTGCAAAACGACTCTTGTCTTATCTCTCTACCAGCACTGAAGTTCATCAGCCCTACAGGAGAACGGGCCGGTACCTTCCCCTTTTTTTGTGTGTTCAGCAGCCAGATGCTTATAGACTTGAGAAAAAAAAAGTGGATCCAAGGACAAGAACCGACATCGGTGCACTGTGAACATCATGCTCCAGTCCTCAGTGTACAGAAGAAGAAAAAAACCTTGAGAAGAAACACCGATTGTGTCTTGTGAATCTCTAAACCGTTTTTTTGCAAGCGATACTTGTGTGATTTTCTTCAATCAGACGTGGCGAGGATGAGGAAACGTTCAGCGAGATGTCCTTGCGAGCTTGTGTGTGTGTGTGTGGGAATAGTTTCGAAAGGTTCTCTAAACGCCTTTACAAAGCAATGAAGCACTGATCTCTCTTTCACGTACGCTTTCTAAAAAAAAGGGGTCGATCCCTGACCCTGAATGCCTCTGCTCTCATCAAGCCCTCGCCATTATCTTTGGAAAAATCACCTTCGAGAGTTTGAGAGAATCTCGCTCGTCACAAGTTTTGACATTGGACGCGCAGCAACTGAGAAGCGAGAGAGACGTTTAAGGAATGAGAAGTAATTGTTGCTTTGCAAAGCGAGACAGGACAGCGTGACGATGTCATTTAGAGGGCAGATGTCATCCTTTCTTAAAACTGGCAGCAACTTCCTCTCTTTGTCAAGCCGCTCCATTTGATGTGGCTTTCCTCTAATTTCATTGCATATTCGAAGTGGTTCGCCTCATTACATACATTTCATCGCAAACGTGAGCCTTCTTGTTTTTGGAAATAGACGTGTTGAGCATTTAATGAGGAAGAATTCATCCGTAAACCGTCCCGTGTTGATGGAGCTGGACTGCTGAACCAGTGTATGTGTTGGATCCCCTTCAGAGAAAAGGTCTGATGGTTCAGTGTGGCTTCATGAGTAGTTGTATGTACTTTACATAAGGTGTGGTTCTACCAAACGTACGCTGAAACGTACATTACTTCAAATTAAAAATGAGTTCCTAAATTATGAGTTGATTAGCATTTCTGTAATTGTTTACAATATTGTTTACTATAAAAGACTGTGACTGCAACACATGGACTACTTTTGTTTTGGCTTTTTTGCAGTTGAGTTGTCTGTCCATCCTGATCTCACGAGGAAACGTAACTATTTCACGTTTTGTTAGTTTAGTGGTACGAAAGGGAGTTTAGTTGTACGAAAATGTCTGATTTTTAAAAAGGAAGTGTCACACCAAACGTCAAATAAAGCCAAACGTCATTGGGGGATAAACAAATCATACTAAATTGTACAAATGAGATTATACGAATTCATACGCCACTAAATTAAAAAGTTACAAATTGCCGTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
16 |
1 |
16 |
1 |
CGENZEB_456000192_0 |
kit receptor tyrosine kinase |
1 |
O24 |
AF153446 |
|
8096 |
"Danio rerio kit receptor tyrosine kinase mRNA, complete cds." |
transmembrane receptor protein tyrosine kinase signaling pathway [0007169] |
molecular function|ATP binding|IEA|GO:0005524|ZFIN|na//cellular component|integral to membrane|IEA|GO:0016021|ZFIN|na//molecular function|kinase activity|IEA|GO:0016301|ZFIN|na//cellular component|membrane|IEA|GO:0016020|ZFIN|na//biological process|neural crest cell migration|TAS|GO:0001755|ZFIN|na//biological process|protein amino acid phosphorylation|IEA|GO:0006468|ZFIN|na//molecular function|protein kinase activity|IEA|GO:0004672|ZFIN|na//molecular function|protein-tyrosine kinase activity|IEA|GO:0004713|ZFIN|na//molecular function|receptor activity|IEA|GO:0004872|ZFIN|na//molecular function|transferase activity|IEA|GO:0016740|ZFIN|na//molecular function|transmembrane receptor protein tyrosine kinase activity|IEA|GO:0004714|ZFIN|na//biological process|transmembrane receptor protein tyrosine kinase signaling pathway|IEA|GO:0007169|ZFIN|na//molecular function|vascular endothelial growth factor receptor activity|IEA|GO:0005021|ZFIN|na |
signal transduction [0007165] |
"Danio rerio kit receptor tyrosine kinase mRNA, complete cds." |
sp:P10721 |
Mast/stem cell growth factor receptor precursor (EC 2.7.1.112) (SCFR) |
PROTGI=125472; PROTID=sp:P10721; PCT=48.59; ALN=963 |
ref:NP_066922.1 |
c-kit [Mus musculus] |
PROTGI=10863917; PROTID=ref:NP_066922.1; PCT=48.72; ALN=959 |
Hs.479754 |
V-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog |
Mm.247073 |
Kit oncogene |
"TC295719 UP|Q9W755 (Q9W755) Kit receptor tyrosine kinase, complete" |
LG20 |
CGTTCGGCGTTATTATCGAGCTCCAAGACTATACAACACACATGAGATAGATGGACTTATAACAATGGAATATCACTGCGTTCTGTTTACTGTTTTGTTGCAGTTAATCATCCAACCAGGCAGGTCGAGGCCTACCATTACCCCAGAAGGTCCCCGGCTAACAGTACCACTGTACAGCAACTTCAGTTTGCATTGCCAGAGTAACAGTACAGTGCGCTGGCAGCATGAAAACCGTCCCATGCGTACCCTGAAGGAGGAACAAAGACAGGGTCAACAGACAATTCTTAAAGTAAACAGAGCCGGCCCTCAACACTTGGGCAAATATTCGTGTAGAGAGGAGAAGACTGGTGAAAAGAGCTCAATCTATGTGTATGTGAAAGATCCTGAAAATCCCTTCAGGAGGACCATCGTGTTCGACATTGTTGCGGCAGAAGGAGATACGACGGTGATCCCATGCTTGGCAACAGACCCAGATATGAAAAACTTGAACCTGCAGAAATGTGACGGACAGCCCCTTCCCAACAGTCTGCGATATTCAGCCAGTCTTGAGACAGGAGTGTCCGTGCAAAAAGTCAGGAAGGAATTTGAGGGATGTTACGTCTGCGTCGGAACTTTGGATGCCGCTACGGTTAAATCAGGAAGATATCAACTTACTGTTCGGCTTGTTCCAGACGCACCTCCTCCGATCACACTGGGTCAGCCTCAAAGAGTGTTGCTCACCCAGGGGGAAAAACTCTCCCTATCCTGCTCCACCTCAAATGTCAACAGCGACATCGCAGTCAAGTGGAAGGCTCCAAACGGAGTGAACCCGTCAGTACACCAGAACTCACATCTTCTGACGGAGCCCATTACTCACGTGAGGACGGCCATCCTCAGCCTGAGCTCTGTGACCATGCAGGACGCCGGCAATTACAGCTGTGAGGCCATAAATGAGAAAGGGACCACTGCAAAGCCAGTCTGGGTCAACATCTATGAAAAAGGATTCATTAATATAACAAGTGTGGATAACAGTACTAGGAGAGTGCGGGCTGGTGAAAGTCTGTCTCTGCGAGTGGTAATGAACGCTTACCCAAAGCCGCATACTTTTTCCTGGAGCTACAGTGGTGTAAAACTTACCAATACTACTGATCATGTGATCACCAGCCGGACACATGGAAATAGTTACACCAGCGAGCTGAAGCTAGTGCGTCTCAAGGTGTCAGAAAGTGGCATTTACACCTTTTCATGCTTAAACCGAGACGCAACTATCCGTCAAACGTTCGAAGTCCATGTCATCAGCAAACCGCAGATTGTGTCCTATGAAGGGCCGATTGATGGACAAGTGCGCTGTGTGGCCGAAGGTTATCCCACTCCTCAGATCAAGTGGTATTACTGTGACCTGCCTCATTCAAGGTGCTCTAATCTACTGAATGCCACTCAGGAGGAGGAGGATGTTGTCACCGTGACCATGACAAATCCTCCCTTTGGGAAAGGCGCAGTGGAGAGCCGTCTAAACATCACCAAGAACAATTACGCCACTCTTGAATGCGTGGCATCTGCCAATGGGGAAATCGTGTACACACTCTTCTCTATCAGCGAGAACACTGTTCCTCATGAACTCTTTACACCGCTGCTCATCGGTTTTGTAGCCGCAGCTGTTATCCTTGTTCTCATCCTGATTGTGCTGACCTACAAGTACATGCAGAAACCCAAATACCAAATCCAATGGAAAGTCATAGAGGGTATTCATGGAAACAACTATGTGTACATTGACCCCACTCAGCTTCCATACGACCACCAGTGGGAGTTTCCCAGAGATAAGCTGCGATTTGGAAAAACTCTTGGATCTGGAGCATTTGGAAAGGTGGTGGAGGCAACGGCTTATGGGATGTCCAAAGCAGACACTGTGATGACTGTAGCTGTGAAGATGCTGAAACCGAGTGCCCATGCAACAGAGAAAGAGGCTCTGATGTCAGAGCTGAAGGTGCTTAGTTATCTTGGCAACCACATTAACATTGTCAACCTGCTTGGGGCATGCACTGTTGGAGGTCCAACTCTAGTTATAACAGAGTACTGCTGTTTCGGCGACCTGTTGAACTTCCTGCGCAGAAGGAGAGTATATTTCTACTACACAACACTAGGCGAAGATGCTTACTATAGAAATGTCATGATGCAGTCAGAACCAAATGACAGCAGAAATGGATACATGACCATGAAGCCCTCTGTACTGGGAATCCTGTCCTCCGAAAACAGACGATCACTTAATAAAGGGGATTCGTACAGTGATTCTGATGCCGTCAGTGAGATTCTGCAGGAAGACGGCTTGACTCTGGACACTGAGGATCTTCTCAGCTTCTCCTACCAAGTAGCCAAAGGGATGGATTTTCTGGCATCAAAGAACTGTATTCACAGAGACCTGGCTGCCAGAAACATTCTCCTCACCCAAGGCAGAGTGGCCAAGATCTGTGACTTTGGACTAGCCCGAGACATCACAACTGACTCAAACTATGTTGTCAAAGGCAATGCTCGTCTCCCAGTAAAATGGATGTCCCCGGAGAGCATCTTTGAGTGTGTTTACACCTTTGAGAGTGACGTCTGGTCTTATGGCATCCTGCTGTGGGAGATCTTCTCTCTTGGGAGTAGTCCATATCCAGGGATGCCTGTGGACTCTAAATTCTATAAGATGATCAAGGAAGGATATCGAATGGAGTCTCCGGAGTTTTCCCCAAGTGAAATGTACGATATCATGCACTCGTGCTGGGATGCCGACCCTGTCAAGAGACCCTCATTTAGCAAGATAGTGGAGAAGATCGAACAACAGATTTCAGACAGCACTAAACACATTTACTTAAACTTCAGCTCCAGGTTGCCAGCAGCACCAGGCCCCCGTGAGGAATCCAGTTCTCATGTCCATCGGCTAAACTCAGTGGGTAGTCACAGCACAGCCACTCAACCCCTGCTCTCCAGCAACGACGTCTTTTTGGATAGATCGAGTCCAAGTCACCCTGTAGTCTGAAAATACCACTCTCAGCAAAAAGCGTCATCTTCTAAGACTCTCTGCGTCATTGTAGCTGTCTGACATACGTGAGGACTTTGGTGAAAAACACTGATCGTAAATCTCAAGAGCTGTCCGGCTCTTTTCACCTTTCTTGCAGACTGTGTATATAAGAAAGGACAGTGATGGTGTGCTTTCCTATTACCATTTCATGCGTTCTTTGGAACTGTGGGACACTGAGTTTTCAAGAAAGCTAATAATCAATGCTGGCATCATTCCATGGTACTATATCTCCAACGCGGATCTGCAGGAGAACTGAACTCGTTTTCTATAAAATCCCTACATTACTTGGGATGTATAAACTTAATAATGCTTATTTTTGCTAGTCGTCGAGTCTTTACACATGACAAAGTCAAAAGTCGGAGACAAGATCAAATCACGATGAGAACTTTGGAAATTCGACGTCATTTTGACATGATCTTTTAGCTGAAAATGCATTATATCGCACCTTTAACACTCGTGTGTTGAATATGACTCACTGAGTGTCAGTAGTAAAAGTGTAAATCGCTGA |
17 |
1 |
17 |
1 |
CGENZEB_456000486_0 |
receptor tyrosine kinase (c-ret) |
2 |
A12 |
AF007949 |
|
17711 |
"Danio rerio receptor tyrosine kinase (c-ret) mRNA, complete cds." |
"regulation of transcription, DNA-dependent [0006355]" |
molecular function|ATP binding|IEA|GO:0005524|ZFIN|na//molecular function|calcium ion binding|IEA|GO:0005509|ZFIN|na//biological process|homophilic cell adhesion|IEA|GO:0007156|ZFIN|na//molecular function|kinase activity|IEA|GO:0016301|ZFIN|na//cellular component|membrane|IEA|GO:0016020|ZFIN|na//biological process|protein amino acid phosphorylation|IEA|GO:0006468|ZFIN|na//molecular function|protein kinase activity|IEA|GO:0004672|ZFIN|na//molecular function|protein-tyrosine kinase activity|IEA|GO:0004713|ZFIN|na//molecular function|receptor activity|IEA|GO:0004872|ZFIN|na//molecular function|transferase activity|IEA|GO:0016740|ZFIN|na |
transcription regulation [0006355] |
"Danio rerio receptor tyrosine kinase (c-ret) mRNA, complete cds." |
ref:NP_066124.1 |
ret proto-oncogene isoform a [Homo sapiens] |
PROTGI=10862703; PROTID=ref:NP_066124.1; PCT=58.94; ALN=1096 |
pir:S29926 |
protein-tyrosine kinase (EC 2.7.1.112) ret - mouse |
PROTGI=346965; PROTID=pir:S29926; PCT=58.04; ALN=1096 |
Hs.350321 |
"Ret proto-oncogene (multiple endocrine neoplasia and medullary thyroid carcinoma 1, Hirschsprung disease)" |
Mm.57199 |
Ret proto-oncogene |
"TC284483 UP|O42362 (O42362) Receptor tyrosine kinase, complete" |
LG13 |
GGGGACTTTCGTGGCTCCTTTCGCTCGAATCAAAACAAGGCAAAGTTCTGTTGTCAGGAATCAAAATACTTTTACCTGTTCGTTGTGACATTACACTTATGATTGACAATTATGGGAAGTACGCGGGGAATCGTGTGGGGAGTGCTCCTGCTTCTCCTGTCTGAAGGTTCATTCGGGCTGTATTTTCCTCAAAGGCTTTACACAGAGAACATCTACGTGGGTCAGCAGCAGGGATCACCGTTGCTTCAGGTCATTTCAATGCGGGAATTCCCTACAGAGAGGCCTTATTTCTTCCTGTGCTCGCACAGAGACGCTTTTACATCATGGTTTCACATAGATGAGGCGTCCGGAGTTCTTTATCTCAACAAAACCCTGGAGTGGAGCGACTTCAGTAGTTTACGCAGCGGCTCAGTTCGCTCCCCGAAGGATCTCACCCTGAAGGTCGGAGTCTCTTCAACTCCCCCAATGAAAGTGATGTGCACCATCCTACCCACAGTGGAGGTCAAACTTTCGTTCATCAATGACACAGCGCCCTCCTGTGGTCAGGTCGAGCTCAGCACATTATGCTTCCCTGAGAAGATCTCCAACCCCCACATCACTGAAAATCGCGAGCCAGGAGCCCTGCGCCACGTGCGCCGCTTCACACACATGAGCATCTGCCCAAACTACACCATCAGCTATGGAGTGGTTGCAGGATCTTCTGTACCGTTTGCGGTCGACGACTCCACTTCTGAACTAGTGGTCACAGCACAAGTGGACCGCGAGGAGAAGGAAGTGTATCATCTGGATATAGTCTGTATGGTACGGACAGAAAGAAATCTGGAGGAGGTCTTCAGATCTTTACATGTGAACATCTATGATGAAGACGATAATTCTCCTTATGTCAACGGGACTGACACTGAAGACGTCTTAGTAGAGTTTGACCGCAGTGAGGGTACTGTGTTTGGGACTCTGTTTGTATATGACAGAGACACAACACCAGTTTATCCAACAAACCAAGTTCAAAATAAGCTGGTGGGGACCCTGATGACAAATGACTCCTGGATCAAAAATAATTTTGCTATTGAACACAAGTTTAGGGAAGAGAAAGCTATTTTTGGAAATGTCCGTGGGACTGTTCATGAATACAAGCTGAAACTCAGTCAGAATCTGTCTGTGACGGAGCAGCGCTCATTTCTGTTGGGCTACCTGGTCAATGACACCACTTTTCCAGGCCCAGAGGGAACAGTGCTGTTACACTTTAATGTGACTGTCCTGCCAGTTCCCATTCGCTTCTCCAATGTCACTTATTCCTTCACGGTCTCACAGAAGGCAACAACTTACTCCCAGATTGGAAAAGTCTGTGTGGAGAACTGTCAGAAGTTTAAGGGCATTGATGTGACCTATCAGTTAGAGATTGTCGACAGGAACATCACTGCTGAAGCTCAGTCCTGTTACTGGGCGGTTAGTCTTGCACAAAACCCGAATGATAATACAGGCGTTCTCTATGTGAACGACACCAAAGTGTTACGCAGACCAGAGTGCCAAGAGCTGGAGTATGTGGTCATTGCCCAGGAGCAGCAGAACAAGCTTCAGGCCAAGACACAGCTCACCGTCAGTTTTCAAGGCGAAGCAGATTCACTGAGAACGGATGAGCCACGATTTCCAGCTTGTGCAGAAAAGAGACAGCGAGGAGACTGTGAGGCGACTCGAGGCCTGGGAGCCCCAACAGGGAGATGCCAGTGGAGACAAGGCCGAGATAAAGGAATATCAAAAAGATACTCCACCTGTTCCCCCAACCTCGGCACGTGCCCTGATGGTTACTGTGATGCCATTGAGAGCAAGAACATCTCCATCTGTCCTCAGGATTGCTCCAGTGAGGCCATAATCGGCGGTTATGAAAGGGACCTGTATGGAATCAAAGCTGGACATGGGACCTGTTACTGCTTTGAAGGAAAGTGCTTCTGTGAAAGGGATGAACCGGAGGATGATATATGTAACGACATGTGCAAGACCGTCATTGCAACTGGTATCATCCTGTCCTTCATTGTCTCCGTTCTCCTGTCCTCGTACTTCATCCACCGTTACCACAAGACCACACCAAAGCCACCCATCGCTTCTGCTGAAATGACCTTCCGTCGGCCAGCCCAGTCCTACCCTATCAGTTACTCGGCCAATAACGTTCGTCGCGCTTCTCTCGATTCCATGGAGAACCAGGTGGCCATTGACACCTTCAAAATACCTGAGGATCCGAAATGGGAGTTTCCACGAAAGAACCTGGTGTTGGGTAAAACTGTTGGAGAAGGAGAGTTTGGGAAGGTGGTGAAGGCCACAGCTTTCCGGCTCAAAGGAAAAGCTGGATACACTACGGTTGCTGTTAAAATGTTAAAAGAAAATGCGTCTCACAGCGAGCTTCGAGACCTTCTGTCAGAGTTCACATTGCTCAAGCAGGTTAATCACCCTCATGTCATTAAAATGTATGGAGCTTGCAGCCAGGATGGTCCATTATACTTAATTGTTGAATACGCCAAGTATGGTTCACTACGTAACTTCCTGAGAGAGAGCCGCAAAGTTGGGCCAAGCTATATGGGCAATGATGCCAACCGCAACTCCAGCTACTTGGAAAACCCAGACGAGAGAGCTCTGACCATGGGCGACCTGATCTCGTTCGCCTGGCAGATCTCTAGAGGAATGCAATACCTAGCTGAGATGAAGCTTGTTCACAGAGACCTGGCTGCAAGGAATGTGCTGGTGGCAGAAGGAAGGAAGATGAAAATATCAGACTTTGGTTTGTCTCGAGATGTCTATGAGGAAGATTCATACGTGAAGAGGAGCAAGGGTCGTATTCCTGTCAAATGGATGGCTATAGAGTCTTTGTTCGATCACATCTACACCACACAAAGTGATGTCTGGTCATTTGGTGTTCTCTTATGGGAGATTGTGACTCTTGGAGGAAACCCCTACCCAGGAATTGCCCCTGAACGACTTTTCAACCTTCTGAAGACCGGCTACAGGATGGAGAAACCAGAGAACTGCACTGATGAAATGTACAATCTGATGCTTCGCTGCTGGAAACAAGAGTCAGATAAACGTCCCACTTTTTCAGACATCAGCAAAGAACTGGAGAAGATGATGGTGAAAAGCAGAGACTATCTGGATCTTGCGGCCTCCACACCGGCAGACGCTCTCCTATATGACGACTCTCTCTCTGAAGAGGACACACCTTTAGTGGACTGTAGTAACGCCCCTCTCCCTCGAACCCTCCCCTCCACTTGGATTGAAAACAAGCTCTATGGCATGTCATACCCGAACTGGCCAGAGAAGAGCCCGGTACCGTTCAACAGACTCGATGCCACTAACCCTGTCTTTACAAGATATGCCAATGATAGTGTTTATGCAAACTGGATGGCTTTGCATTCTCCCGCAAAAATCGTGGACACAATCGATAGTTAAAAACGCAAGCCAAAATCAATGGCGGAAAAGACACGGGGGGTGGGGAGATGTGTATATTTCTATGAAACTGTATATATATATGTATATGTTGTATGATGATAAAGCGGGTTCCCTTTTATTTCTGCTGTTGTGTAGATGATGAGAGATTTCAAATTGGCTGGAAATGCATAAACATGCTTCAAGCAGCTTCTAGGTGATTGTTACCACGAGGCCTCCGTGCTGTATCTCTGCATGACTCTGTACAGTTTAATGTCCATGTTTAAGTGCCTGTGCCGCTTCTGTTAGAGAACACCATAATAAATGCATGACCGAGACGATCTTGGTCCCACTCCAGGAATTAAAGGGAGCTTCTTTACCATCAAATACTGCAGAAGTTTGTCGCAAATACTGGACATGTTTATTTGGAAAAAGAAAAGTTTGTTTTTTCTTGATCGTATGTCAGGATTGGAAAGAATCGTGTTTATTTTGTTTCCTTGTTTTTTAAGTAATGATATTTCAAGGCTCTGTGGTGATAATGAGTTATGCATATTGCCATAACAGAGTATAAATATGTTTAATTTAATGTCATATATTGTGATTTAATTTTCATTCCCTGTAAAGACATTATTTGTGCAACAATAACTACATTAAGCTGAGTGTGATCTTCAATATGTTGTCCGAAGATTACGTTTCAAACAATAAAACCTGTTAGAATAAAAAAAAAAAAAAAAAAA |
18 |
1 |
18 |
1 |
CGENZEB_456000492_0 |
nk2.2 gene NK-2 homeobox protein. |
2 |
A24 |
X85977 |
|
31 |
D.rerio nk2.2 gene mRNA for NK-2 homeobox protein. |
"regulation of transcription, DNA-dependent [0006355]" |
"molecular function|DNA binding|IEA|GO:0003677|ZFIN|na//biological process|development|IEA|GO:0007275|ZFIN|na//cellular component|nucleus|IEA|GO:0005634|ZFIN|na//biological process|regulation of transcription, DNA-dependent|IEA|GO:0006355|ZFIN|na//molecular function|transcription factor activity|IEA|GO:0003700|ZFIN|na" |
transcription regulation [0006355] |
D.rerio nk2.2 gene mRNA for NK-2 homeobox protein. |
ref:NP_002500.1 |
"NK2 transcription factor related, locus 2 [Homo sapiens]" |
PROTGI=4505401; PROTID=ref:NP_002500.1; PCT=83.88; ALN=269 |
prf:2207236A |
|
PROTGI=1587713; PROTID=prf:2207236A; PCT=83.15; ALN=269 |
Hs.516922 |
"NK2 transcription factor related, locus 2 (Drosophila)" |
Mm.330639 |
"NK2 transcription factor related, locus 2 (Drosophila)" |
"TC282418 UP|NK22_BRARE (Q90481) Homeobox protein Nkx-2.2 (Homeobox protein NK-2 homolog B), complete" |
LG17 |
GGGGGAGACCAACCTTATATGGACTGATCAGTCTGGTAATGGCTTATTTCCCCCTAACACCCAGCAGTAGCGCAATATCCATGAGCTAGATATACCACTTCAGTCACTTTGGCATTCTTCCTGGACTTACTAGAACTGATTTCTCCGCTACTTTTTTCCCCAAGCAACGGTTACCTACCGAGCCTCATGCGTCGACTTCAGTTTACTTCGCGCTGAAACGGCACTAATCCTGCATTCATTAAATCATCGGTGTTTTGTGTTTTTAAACAGAGGATTGTCAAACTGGTGCAGCAACTTGACTGCATCAAATGCTCCAGAACATGTCGTTGACCAACACAAAGACGGGCTTTTCAGTAAAGGACATTTTGGACCTCCCTGATACTAACGATGAAGAAGGATCTATCACCGGCACCGAGGAAGATACGGAGGGTTCTGAGGCGACTAAAACGCCTGGAGTGTTAGTGCAAAGTCCTTTAGAGAATGTTCAAAACCTGCCTTTAAAGAATCCATTTTATGATAATAGCGACAATCCTTATACTAGATGGCTCGCAACCACGGACAGCATCCAATACTCATTACACGGCCTGTCCGCGAACTCTCAAGACACGTCCGCAAAATCTCCGGAACCTTCAGCTGATGAATCGCCGGACAATGACAAGGAAACTTCAAGCAACGGCAGCGACTCTGGTAAGAAGCAAAAGGAGGGTGCTCTTTTCCAAGGCACAAACTTACGAACTCGAGCGCCGGTTTAGGCAACAGAGATATCTGTCAGCCCCGGAGAGGGAGCATCTCGCCAGTTTGATTCGCCTGACTCCAACCCAAGTGAAAATCTGGTTCCAGAACCACCGATATAAAATGAAGAGAGCCCGGGCGGAGAAAGGTATGGAAGTGACCCATCTCCCTTCTCCTAGGCGGGTGGCCGTGCCTGTGTTAGTCAGAGACGGCAAACCTTGCCATACGCTAAAAGCTCAGGACTTGGCAGCTACTTTTCAGGCTGGAATTCCGTTCTCTGCGTATAGCGCCCAGTCTCTCCAGCACATGCAATATAACGCGCATTACAGCGCCGCCACTACACCACAGTTCCCAACAGCACATCACTTGGTGCAAACGCAACAGTGGACTTGGTGAACAAATACTGACTTGCAATGCAGGGTTGCATTTTAAAGACCGTGGTAGGGAGCTTTCCAAACAAAAATACAAGACTTTTTATTTTTGCAGCTTGACCCTTTCTCACCAATTTATTTTGGGGATTGACGTGTGCGCCATGTTTACATGTTTTCGTTAAGAAAACCGGGTCAAGCCTCTCCCCAAATTTAAGAATGTTAAAGCTCTTGTGAAATTTTGTAAAGTATGTTTGTGTGTTGTAGAAATGTTTTTCTTTTGTCCTTCGTGTTATACGCACGTGCAAAACCACTTTATGATTATAGAAAATTTTATTTCTTTCTTTTACAATGGACCGAATATATTTATGGCCATGAATAAACACTGGCAATCCTTAGCTTATTTCATTGGTTTGTTTTATATGTAAATATTTTGTGATAACTGTTTGCAATATTATGTTTGACCGTCCAGTAAGCTATATCCTAAATATATGCCATATTTAGGGAAGATGGAACATCATTGTCGACAATATCCCTTCTGTTAATTTCAGCAGGTAACAACGCGCGCTGGCGAGGGAAGTCTACAGTTCTTTTTATTAAAACTTTTAATAAAATTATGTGTTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
19 |
1 |
19 |
1 |
CGENZEB_456000498_0 |
homeobox protein SIX9 (Six9) |
2 |
C12 |
AF108820 |
|
|
"Danio rerio homeobox protein SIX9 (Six9) mRNA, partial cds." |
"regulation of transcription, DNA-dependent [0006355]" |
"molecular function|DNA binding|IEA|GO:0003677|ZFIN|na//biological process|development|IEA|GO:0007275|ZFIN|na//cellular component|nucleus|IEA|GO:0005634|ZFIN|na//biological process|regulation of transcription, DNA-dependent|IEA|GO:0006355|ZFIN|na//molecular function|transcription factor activity|IEA|GO:0003700|ZFIN|na" |
transcription regulation [0006355] |
"Danio rerio homeobox protein SIX9 (Six9) mRNA, partial cds." |
sp:Q9NPC8 |
Homeobox protein SIX2 (Sine oculis homeobox homolog 2) [Gene: SIX2] - |
PROTGI=12230598; PROTID=sp:Q9NPC8; PCT=88.89; ALN=63 |
pir:S60751 |
homeotic protein six1 - mouse (fragment) |
PROTGI=2137402; PROTID=pir:S60751; PCT=88.89; ALN=63 |
Hs.101937 |
Sine oculis homeobox homolog 2 (Drosophila) |
Mm.5039 |
Sine oculis-related homeobox 2 homolog (Drosophila) |
|
|
AAATTCCCGTTGCCCCGGACCATCTGGGATGGAGAGGAGACCAGCTACTGCTTCAAGGAAAAGTCTCGAAGTGTGCTGAGAGAGTGGTACTGCAGAAAGCCGTATCCCTCGCCGCGAGAAAAACGAGACTTGGCTGCAGCCACCGGACTGACAGCTACACAAGTCAGTAACTGGTTCAAGAACCGGCGACA |
20 |
1 |
20 |
1 |
CGENZEB_456000504_0 |
myocyte enhancer factor 2C MEF2C (mef2C) |
2 |
C24 |
U66569 |
|
267 |
"Danio rerio myocyte enhancer factor 2C MEF2C (mef2C) mRNA, complete cds." |
"regulation of transcription, DNA-dependent [0006355]" |
"molecular function|ATP binding|IEA|GO:0005524|ZFIN|na//biological process|ATP synthesis coupled proton transport|IEA|GO:0015986|ZFIN|na//molecular function|DNA binding|IEA|GO:0003677|ZFIN|na//molecular function|hydrogen-transporting ATP synthase activity, rotational mechanism|IEA|GO:0046933|ZFIN|na//molecular function|hydrogen-transporting ATPase activity, rotational mechanism|IEA|GO:0046961|ZFIN|na//cellular component|nucleus|IEA|GO:0005634|ZFIN|na//cellular component|proton-transporting two-sector ATPase complex|IEA|GO:0016469|ZFIN|na//biological process|regulation of transcription, DNA-dependent|IEA|GO:0006355|ZFIN|na//biological process|transcription|IEA|GO:0006350|ZFIN|na//molecular function|transcription factor activity|IEA|GO:0003700|ZFIN|na" |
transcription regulation [0006355] |
"Danio rerio myocyte enhancer factor 2C MEF2C (mef2C) mRNA, complete cds." |
sp:Q06413 |
Myocyte-specific enhancer factor 2C [Gene: MEF2C] - Homo sapiens |
PROTGI=2500875; PROTID=sp:Q06413; PCT=76.20; ALN=449 |
pir:A47561 |
"transcription factor MEF-2C, myocyte enhancer factor 2C - mouse" |
PROTGI=477011; PROTID=pir:A47561; PCT=76.65; ALN=449 |
|
|
|
|
"TC298157 UP|Q6NSN7 (Q6NSN7) Zgc:64184 protein, partial (97%)" |
LG10 |
GAGAAGGAGACGAGTGTGGACTGTACTTTTGGAAGAGGAAGGAAAAAACAGACAGAAGTCATGGGGAGGAAAAAGATTCAGATTGCGCGGATAATGGACGAACGCAACAGACAGGTTACGTTTACAAAGAGGAAGTTTGGACTGATGAAGAAGGCCTACGAGCTGAGCGTATTGTGTGACTGTGAGATCGCCCTCATCATCTTCAACAGCACTAATAAACTCTTCCAGTACGCCAGCACGGACATGGACAAAGTTCTGCTGAAATACACCGAGTACAACGAGCCGCATGAGAGTCGGACTAACTCAGACATCGTGGAGACGCTGAGGAAGAAGGGCCTAAACGGCTGTGACAGTCCTGATATCGATGCTGAAGATTCAGGCCACAGTCCAGAATCTGAGGACAAATATCGCAAAATCAACGAGGACATCGACCTGATGATCAGCCGGCAGAGACTGTGTGCCATCCCTCAGTCTAACTACGACATGCCTGTCTCCATCCCCGTCAGCAACCCCAACAGCCTGATCTACGGCCACCCAGGAGCGTCTATGGGTAACCCAAACCTGCTGCCGTTGACCCATCCGTCCCTGCAGAGGAACAGCATGTCCCCTGGAGTCACCCACCGGCCCCCGAGTGCAGGAAACACAGGAAACGGGTACGGAAACCACCGCAACTCCCCTGGTCTGCTGGTCTCTCCAGGGAACATGAGCAAGAACCTGCAGGCCAAATCTCCTCCGTCCATGAACATGAGCCTGAGCCGCAAACCCGACCTGCGCGTCCTCATCCCACCTGGAGCCAAGAACACCATGCCATCAATCAATCAGCGAATCAGCAGCTCTCAGTCGGCTCAGTCTCTCAGCACACCTGTGGTGTCTGTGGCCACACCCACCCTACCTGGAGAAGTGATGGGCGGATACCCGTCTGCCATCAATACCTCATATGGGACAGAATATTCTCTGAGCAGTGGAGATCTGTCCTCTCTGTCTGCGTTTAACAGCTCCGCGTCTCTTCATCTGGGCTCCATGACCGGCTGGCCGCAGAACATGCAGCATTCTGGCCTGGGGCATCTGGGGAACTGCAGCAGTGCTCAGCTGTGCCAGAGCTCTGCCCTATCTCTGCCGTCCAATCAGAACCTGCACATTAAGTCGGAGCCGGTGTCTCCTCCACGGGATCGAGCGAGCGGGACCCCGGGGCTGTACGGCGTGCCCCAGCAGACCCCGCTCCGGCAGGACTCGGGACGCTCCCCGGTGGACAGTCTAAGCAGCTGCGGCAGCTCGTACGACGGCAGCGACCGCGACGAACACCGCGCAAACTTCCACTCGCCCGTGGGACTGATGAGAGCAGCCGAAAATGAGCGGCAGAGCCCGTCCGTCAAGCGCATGCGTCTGTCCGAGGCCGGCTGGGCATCCTGAACACCATTGACAAACAGCCCTGTGAAAAAGTTTGCACCCCCTATATATTGAGTTTCAAGCTTTTCTGTATTCGGACGTAATGCCAAAAAAATTTGATTGACCTTATTCTTCATATTTGAGCAGTCGTCCTGAACACTGCTGAGAAACGGCACTGTGAAAAAGTTTGCACCCCCCATATATTGAATTTCAAGCTTTTCCGTATTCAGACATTATACATAAAAATCTATTGACCTTACTCATATACAAGTGAATGTCCTGAACAATGCTAAGAAACGGCACTGGGAAAAAGTTTGCATCCCCCATATATTGAATTTCAAGCTTTTCCATAATCTGACTTAATGCAAATTTCAAGCTTTTACTTATTCGGACATAATACATGAAAAATCTATTGACTTTACTCATTTACAAGTGGATGTCCTGAACAATGCTGAGAAACGGCACTGTGAAAAAGTTTGTACCCCCATATTGAATTTCAAGCTTTTGCTATTCGGGCGTAATACATAAAAATCTACTAACCTTACTCAATTACGAGCGGATGTGTTGAACACTGCTAAAAATGGCACTGTGAAAAAGTTTGCACCCCCATATTGAATTTCATGTCTTCAAGTATTCGAACATAATACAAAAGAAAACACTGACCTTATTCTTCATAAATGAACAGGCGTCTTTAACACCACTGTGAAAAAGTCTACACCCCCTCAAAATGAATTTCTTTTTCTCTGTATTTGTAAAAAATGTTGACCTTATTCGTCATATACAGTACACGCGGATGTCCTGAACAATGCTGAAAAACGGCACTGTGAAAAAGTTTGCACCCCCCACATATATTGAATTTCAAGCATTTTCATATTCAGACATAAATAAATTTATTTATCTTATTTATATATGAGCAAGCATCTTGAACAATGCTGAACATGGCACTGTGAAAAAGTTTGCACCCCCATATATTGAATTTGTAGCTTTTCCGTATTTGAGAGTAATACAAAAATATCTATTGACCTATCTTCATATACGAGCAGGCATCTTGAACACTGCTGAAAATGGGCACTGTGAAAAAGTTTGCACCCCCCATTTTAAATTTAAAGCATTTCCGTATTCGGACGTAGAATAAATTTCAAGCTTTTCAGTATTCATCCATATATATTCCATATTTGGACGTAATTCGTAAAAATCGTTTGACCTTATTTTTCATATACAAGCAGGCATCTCGAACACCACTGTGAAAAAGTTTGCACCCCCCATATATTGAAATTCAAGCTTTTTCATATAATGTAATACAAACAAAAATCTATTGACCTTATTTATATATGAGCAAGTGTCATGAACAGCATTGTGATAAAGTTTGCGCCCCCCATATAGAGTTTGGAGCCTTATCGTATTCTGGCATAATACAACAAAAAATCTAATATATGTTGCGAACGCTTTTATTTGAGTATGGTGATGTGCATCCTCCTAAAACAGAATATTGAGTAGGGGGTGGGGCTTTCTTTTTGCACATAGTTTCCTCAGCTAACGGTAAAAGGGGCGTGGTTAAGAATATTGTTTCTGAAGTGCGGAATGAACCACCAACTATTCCAGCATATGTTTTTTTTTACTGTGGATGCCCTTTCAGCCACAACCCAGTACTGGGAAACACCCATACACACTTACATGCACACTCATACACTATGGCCAATTTAGTTTATTCAATTCACCTATAGCGCATGACTGTGGGGGAAATCACCCGGAGGAAACCCACGCCAACACAAGGAGAACATGCAAACTTCACACAAAATGCCAACTGGCCCAGCCAGGACTCGATCCAGTGACCTTTTTGCTGTGAGGTGACAGTGCTAACCACTGAGCCACAGTGCCGCCATACTACAGTCAGCCGCACCAAAAAAGTTGATGGAAATTTTAAAAATTCATGATTTTTTATTTGTATTTATTTATTTTTTTGTGTTCACGTTAGGTGTATCTTATTTAGTATTGTAATTTTCATCAATGCCACATACTCTTCTTCATCTGAGGGTCTTTTATGTCAAATTTTAAGATCTTACCTAGGATCTGATCATATTTCATGTCCTAATAAAAGGATAAATAATCGGATTTAAACAGGGTGCACAAACTTTTTCACACGACTGTATGTGTGTTTATTCTGCGGAGTGTGCGTGCTGCATTAAAGTATTACAAATGATATATATATATCAGGTATACGGGGCGGGGGGCGTGTTTGTGATTTTGGAGTTTTTTTGGGGGGGCGGGGCAAAGGGATATGCATCGCTTGTGCCACGTGTGGGGTAAAAAATTTAATTA |