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The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference ROS_Cfam_1.0
Genomic
-
NC_051807.1 Reference ROS_Cfam_1.0
- Range
-
47511193..47631121 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038661249.1 → XP_038517177.1 chromodomain-helicase-DNA-binding protein 2 isoform X6
- UniProtKB/TrEMBL
-
A0A8I3MFG4
- Conserved Domains (6) summary
-
- PLN03142
Location:481 → 1034
- PLN03142; Probable chromatin-remodeling complex ATPase chain; Provisional
- cd18661
Location:389 → 460
- CD2_tandem_CHD1-2_like; repeat 2 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 1 and 2, and similar proteins
- cd18666
Location:272 → 356
- CD1_tandem_CHD1-2_like; repeat 1 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 1 and 2, and similar proteins
- cd18054
Location:477 → 713
- DEXHc_CHD2; DEAH-box helicase domain of the chromodomain helicase DNA binding protein 2
- pfam13907
Location:1484 → 1566
- DUF4208; Domain of unknown function (DUF4208)
- pfam18375
Location:1143 → 1231
- CDH1_2_SANT_HL1; CDH1/2 SANT-Helical linker 1
-
XM_038661246.1 → XP_038517174.1 chromodomain-helicase-DNA-binding protein 2 isoform X3
- UniProtKB/TrEMBL
-
A0A8I3RQS8
- Conserved Domains (6) summary
-
- PLN03142
Location:445 → 998
- PLN03142; Probable chromatin-remodeling complex ATPase chain; Provisional
- cd18661
Location:353 → 424
- CD2_tandem_CHD1-2_like; repeat 2 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 1 and 2, and similar proteins
- cd18666
Location:236 → 320
- CD1_tandem_CHD1-2_like; repeat 1 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 1 and 2, and similar proteins
- cd18054
Location:441 → 677
- DEXHc_CHD2; DEAH-box helicase domain of the chromodomain helicase DNA binding protein 2
- pfam13907
Location:1448 → 1530
- DUF4208; Domain of unknown function (DUF4208)
- pfam18375
Location:1107 → 1195
- CDH1_2_SANT_HL1; CDH1/2 SANT-Helical linker 1
-
XM_038661248.1 → XP_038517176.1 chromodomain-helicase-DNA-binding protein 2 isoform X5
- UniProtKB/TrEMBL
-
A0A8I3MLI8
- Related
- ENSCAFP00845003732.1, ENSCAFT00845004673.1
- Conserved Domains (6) summary
-
- PLN03142
Location:481 → 984
- PLN03142; Probable chromatin-remodeling complex ATPase chain; Provisional
- cd18661
Location:389 → 460
- CD2_tandem_CHD1-2_like; repeat 2 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 1 and 2, and similar proteins
- cd18666
Location:272 → 356
- CD1_tandem_CHD1-2_like; repeat 1 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 1 and 2, and similar proteins
- cd18054
Location:477 → 713
- DEXHc_CHD2; DEAH-box helicase domain of the chromodomain helicase DNA binding protein 2
- pfam13907
Location:1434 → 1516
- DUF4208; Domain of unknown function (DUF4208)
- pfam18375
Location:1093 → 1181
- CDH1_2_SANT_HL1; CDH1/2 SANT-Helical linker 1
-
XM_038661247.1 → XP_038517175.1 chromodomain-helicase-DNA-binding protein 2 isoform X4
- UniProtKB/TrEMBL
- A0A8I3MFG4, A0A8I3MJR9
- Related
- ENSCAFP00845003779.1, ENSCAFT00845004728.1
- Conserved Domains (6) summary
-
- PLN03142
Location:481 → 1034
- PLN03142; Probable chromatin-remodeling complex ATPase chain; Provisional
- cd18661
Location:389 → 460
- CD2_tandem_CHD1-2_like; repeat 2 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 1 and 2, and similar proteins
- cd18666
Location:272 → 356
- CD1_tandem_CHD1-2_like; repeat 1 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 1 and 2, and similar proteins
- cd18054
Location:477 → 713
- DEXHc_CHD2; DEAH-box helicase domain of the chromodomain helicase DNA binding protein 2
- pfam13907
Location:1437 → 1519
- DUF4208; Domain of unknown function (DUF4208)
- pfam18375
Location:1143 → 1231
- CDH1_2_SANT_HL1; CDH1/2 SANT-Helical linker 1
-
XM_038661244.1 → XP_038517172.1 chromodomain-helicase-DNA-binding protein 2 isoform X1
- UniProtKB/TrEMBL
-
A0A8I3MFG4
- Conserved Domains (6) summary
-
- PLN03142
Location:481 → 1034
- PLN03142; Probable chromatin-remodeling complex ATPase chain; Provisional
- cd18661
Location:389 → 460
- CD2_tandem_CHD1-2_like; repeat 2 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 1 and 2, and similar proteins
- cd18666
Location:272 → 356
- CD1_tandem_CHD1-2_like; repeat 1 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 1 and 2, and similar proteins
- cd18054
Location:477 → 713
- DEXHc_CHD2; DEAH-box helicase domain of the chromodomain helicase DNA binding protein 2
- pfam13907
Location:1484 → 1566
- DUF4208; Domain of unknown function (DUF4208)
- pfam18375
Location:1143 → 1231
- CDH1_2_SANT_HL1; CDH1/2 SANT-Helical linker 1
-
XM_038661245.1 → XP_038517173.1 chromodomain-helicase-DNA-binding protein 2 isoform X2
- UniProtKB/TrEMBL
- A0A8I3MFG4, A0A8I3MN76
- Related
- ENSCAFP00845003541.1, ENSCAFT00845004427.1
- Conserved Domains (6) summary
-
- PLN03142
Location:468 → 1021
- PLN03142; Probable chromatin-remodeling complex ATPase chain; Provisional
- cd18661
Location:376 → 447
- CD2_tandem_CHD1-2_like; repeat 2 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 1 and 2, and similar proteins
- cd18666
Location:259 → 343
- CD1_tandem_CHD1-2_like; repeat 1 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 1 and 2, and similar proteins
- cd18054
Location:464 → 700
- DEXHc_CHD2; DEAH-box helicase domain of the chromodomain helicase DNA binding protein 2
- pfam13907
Location:1471 → 1553
- DUF4208; Domain of unknown function (DUF4208)
- pfam18375
Location:1130 → 1218
- CDH1_2_SANT_HL1; CDH1/2 SANT-Helical linker 1
-
XM_038661250.1 → XP_038517178.1 chromodomain-helicase-DNA-binding protein 2 isoform X7
- Conserved Domains (3) summary
-
- cd18661
Location:389 → 460
- CD2_tandem_CHD1-2_like; repeat 2 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 1 and 2, and similar proteins
- cd18666
Location:272 → 356
- CD1_tandem_CHD1-2_like; repeat 1 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 1 and 2, and similar proteins
- cl28899
Location:477 → 514
- DEAD-like_helicase_N; N-terminal helicase domain of the DEAD-box helicase superfamily
Alternate UMICH_Zoey_3.1
Genomic
-
NC_049263.1 Alternate UMICH_Zoey_3.1
- Range
-
47029130..47148452 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038471827.1 → XP_038327755.1 chromodomain-helicase-DNA-binding protein 2 isoform X6
-
XM_038471824.1 → XP_038327752.1 chromodomain-helicase-DNA-binding protein 2 isoform X3
-
XM_038471826.1 → XP_038327754.1 chromodomain-helicase-DNA-binding protein 2 isoform X5
- Conserved Domains (6) summary
-
- PLN03142
Location:481 → 984
- PLN03142; Probable chromatin-remodeling complex ATPase chain; Provisional
- cd18661
Location:389 → 460
- CD2_tandem_CHD1-2_like; repeat 2 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 1 and 2, and similar proteins
- cd18666
Location:272 → 356
- CD1_tandem_CHD1-2_like; repeat 1 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 1 and 2, and similar proteins
- cd18054
Location:477 → 713
- DEXHc_CHD2; DEAH-box helicase domain of the chromodomain helicase DNA binding protein 2
- pfam13907
Location:1434 → 1516
- DUF4208; Domain of unknown function (DUF4208)
- pfam18375
Location:1093 → 1181
- CDH1_2_SANT_HL1; CDH1/2 SANT-Helical linker 1
-
XM_038471825.1 → XP_038327753.1 chromodomain-helicase-DNA-binding protein 2 isoform X4
-
XM_038471822.1 → XP_038327750.1 chromodomain-helicase-DNA-binding protein 2 isoform X1
-
XM_038471823.1 → XP_038327751.1 chromodomain-helicase-DNA-binding protein 2 isoform X2
- Conserved Domains (6) summary
-
- PLN03142
Location:468 → 1021
- PLN03142; Probable chromatin-remodeling complex ATPase chain; Provisional
- cd18661
Location:376 → 447
- CD2_tandem_CHD1-2_like; repeat 2 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 1 and 2, and similar proteins
- cd18666
Location:259 → 343
- CD1_tandem_CHD1-2_like; repeat 1 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 1 and 2, and similar proteins
- cd18054
Location:464 → 700
- DEXHc_CHD2; DEAH-box helicase domain of the chromodomain helicase DNA binding protein 2
- pfam13907
Location:1471 → 1553
- DUF4208; Domain of unknown function (DUF4208)
- pfam18375
Location:1130 → 1218
- CDH1_2_SANT_HL1; CDH1/2 SANT-Helical linker 1
-
XM_038471828.1 → XP_038327756.1 chromodomain-helicase-DNA-binding protein 2 isoform X7
Alternate UNSW_CanFamBas_1.0
Genomic
-
NC_049744.1 Alternate UNSW_CanFamBas_1.0
- Range
-
47260475..47380113 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038597063.1 → XP_038452991.1 chromodomain-helicase-DNA-binding protein 2 isoform X6
-
XM_038597060.1 → XP_038452988.1 chromodomain-helicase-DNA-binding protein 2 isoform X3
-
XM_038597062.1 → XP_038452990.1 chromodomain-helicase-DNA-binding protein 2 isoform X5
- Conserved Domains (6) summary
-
- PLN03142
Location:481 → 984
- PLN03142; Probable chromatin-remodeling complex ATPase chain; Provisional
- cd18661
Location:389 → 460
- CD2_tandem_CHD1-2_like; repeat 2 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 1 and 2, and similar proteins
- cd18666
Location:272 → 356
- CD1_tandem_CHD1-2_like; repeat 1 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 1 and 2, and similar proteins
- cd18054
Location:477 → 713
- DEXHc_CHD2; DEAH-box helicase domain of the chromodomain helicase DNA binding protein 2
- pfam13907
Location:1434 → 1516
- DUF4208; Domain of unknown function (DUF4208)
- pfam18375
Location:1093 → 1181
- CDH1_2_SANT_HL1; CDH1/2 SANT-Helical linker 1
-
XM_038597061.1 → XP_038452989.1 chromodomain-helicase-DNA-binding protein 2 isoform X4
-
XM_038597058.1 → XP_038452986.1 chromodomain-helicase-DNA-binding protein 2 isoform X1
-
XM_038597059.1 → XP_038452987.1 chromodomain-helicase-DNA-binding protein 2 isoform X2
- Conserved Domains (6) summary
-
- PLN03142
Location:468 → 1021
- PLN03142; Probable chromatin-remodeling complex ATPase chain; Provisional
- cd18661
Location:376 → 447
- CD2_tandem_CHD1-2_like; repeat 2 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 1 and 2, and similar proteins
- cd18666
Location:259 → 343
- CD1_tandem_CHD1-2_like; repeat 1 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 1 and 2, and similar proteins
- cd18054
Location:464 → 700
- DEXHc_CHD2; DEAH-box helicase domain of the chromodomain helicase DNA binding protein 2
- pfam13907
Location:1471 → 1553
- DUF4208; Domain of unknown function (DUF4208)
- pfam18375
Location:1130 → 1218
- CDH1_2_SANT_HL1; CDH1/2 SANT-Helical linker 1
-
XM_038597064.1 → XP_038452992.1 chromodomain-helicase-DNA-binding protein 2 isoform X7
Alternate UU_Cfam_GSD_1.0
Genomic
-
NC_049224.1 Alternate UU_Cfam_GSD_1.0
- Range
-
47591992..47711357 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038532748.1 → XP_038388676.1 chromodomain-helicase-DNA-binding protein 2 isoform X6
- UniProtKB/TrEMBL
- A0A8C0RC77, A0A8P0SUQ0
-
XM_038532745.1 → XP_038388673.1 chromodomain-helicase-DNA-binding protein 2 isoform X3
- UniProtKB/TrEMBL
- A0A8C0TUT4, A0A8P0NTC2
-
XM_038532747.1 → XP_038388675.1 chromodomain-helicase-DNA-binding protein 2 isoform X5
- UniProtKB/TrEMBL
-
A0A8I3MLI8
- Conserved Domains (6) summary
-
- PLN03142
Location:481 → 984
- PLN03142; Probable chromatin-remodeling complex ATPase chain; Provisional
- cd18661
Location:389 → 460
- CD2_tandem_CHD1-2_like; repeat 2 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 1 and 2, and similar proteins
- cd18666
Location:272 → 356
- CD1_tandem_CHD1-2_like; repeat 1 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 1 and 2, and similar proteins
- cd18054
Location:477 → 713
- DEXHc_CHD2; DEAH-box helicase domain of the chromodomain helicase DNA binding protein 2
- pfam13907
Location:1434 → 1516
- DUF4208; Domain of unknown function (DUF4208)
- pfam18375
Location:1093 → 1181
- CDH1_2_SANT_HL1; CDH1/2 SANT-Helical linker 1
-
XM_038532746.1 → XP_038388674.1 chromodomain-helicase-DNA-binding protein 2 isoform X4
- UniProtKB/TrEMBL
- A0A8C0RC77, A0A8C0TTC3, A0A8P0SSI9, A0A8P0SUQ0
-
XM_038532743.1 → XP_038388671.1 chromodomain-helicase-DNA-binding protein 2 isoform X1
- UniProtKB/TrEMBL
- A0A8C0RC77, A0A8P0SUQ0
-
XM_038532744.1 → XP_038388672.1 chromodomain-helicase-DNA-binding protein 2 isoform X2
- UniProtKB/TrEMBL
- A0A8C0MA63, A0A8C0RC77, A0A8P0ND39, A0A8P0SUQ0
- Conserved Domains (6) summary
-
- PLN03142
Location:468 → 1021
- PLN03142; Probable chromatin-remodeling complex ATPase chain; Provisional
- cd18661
Location:376 → 447
- CD2_tandem_CHD1-2_like; repeat 2 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 1 and 2, and similar proteins
- cd18666
Location:259 → 343
- CD1_tandem_CHD1-2_like; repeat 1 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 1 and 2, and similar proteins
- cd18054
Location:464 → 700
- DEXHc_CHD2; DEAH-box helicase domain of the chromodomain helicase DNA binding protein 2
- pfam13907
Location:1471 → 1553
- DUF4208; Domain of unknown function (DUF4208)
- pfam18375
Location:1130 → 1218
- CDH1_2_SANT_HL1; CDH1/2 SANT-Helical linker 1
-
XM_038532749.1 → XP_038388677.1 chromodomain-helicase-DNA-binding protein 2 isoform X7
Alternate Dog10K_Boxer_Tasha Primary Assembly
Genomic
-
NC_006585.4 Alternate Dog10K_Boxer_Tasha Primary Assembly
- Range
-
49802181..49921599 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_005618325.4 → XP_005618382.1 chromodomain-helicase-DNA-binding protein 2 isoform X6
- UniProtKB/TrEMBL
- A0A8C0RC77, A0A8P0SUQ0
- Conserved Domains (4) summary
-
- cd00024
Location:295 → 357
- CHROMO; Chromatin organization modifier (chromo) domain is a conserved region of around 50 amino acids found in a variety of chromosomal proteins, which appear to play a role in the functional organization of the eukaryotic nucleus. Experimental evidence ...
- pfam00385
Location:391 → 460
- Chromo; Chromo (CHRromatin Organisation MOdifier) domain
- pfam13907
Location:1484 → 1566
- DUF4208; Domain of unknown function (DUF4208)
- cl26465
Location:481 → 1034
- SNF2_N; SNF2 family N-terminal domain
-
XM_022416901.2 → XP_022272609.1 chromodomain-helicase-DNA-binding protein 2 isoform X3
- UniProtKB/TrEMBL
- A0A8C0TUT4, A0A8P0NTC2
- Conserved Domains (4) summary
-
- cd00024
Location:259 → 321
- CHROMO; Chromatin organization modifier (chromo) domain is a conserved region of around 50 amino acids found in a variety of chromosomal proteins, which appear to play a role in the functional organization of the eukaryotic nucleus. Experimental evidence ...
- pfam00385
Location:355 → 424
- Chromo; Chromo (CHRromatin Organisation MOdifier) domain
- pfam13907
Location:1448 → 1530
- DUF4208; Domain of unknown function (DUF4208)
- cl26465
Location:445 → 998
- SNF2_N; SNF2 family N-terminal domain
-
XM_038474394.1 → XP_038330322.1 chromodomain-helicase-DNA-binding protein 2 isoform X5
- UniProtKB/TrEMBL
-
A0A8I3MLI8
- Conserved Domains (6) summary
-
- PLN03142
Location:481 → 984
- PLN03142; Probable chromatin-remodeling complex ATPase chain; Provisional
- cd18661
Location:389 → 460
- CD2_tandem_CHD1-2_like; repeat 2 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 1 and 2, and similar proteins
- cd18666
Location:272 → 356
- CD1_tandem_CHD1-2_like; repeat 1 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 1 and 2, and similar proteins
- cd18054
Location:477 → 713
- DEXHc_CHD2; DEAH-box helicase domain of the chromodomain helicase DNA binding protein 2
- pfam13907
Location:1434 → 1516
- DUF4208; Domain of unknown function (DUF4208)
- pfam18375
Location:1093 → 1181
- CDH1_2_SANT_HL1; CDH1/2 SANT-Helical linker 1
-
XM_005618324.4 → XP_005618381.1 chromodomain-helicase-DNA-binding protein 2 isoform X4
- UniProtKB/TrEMBL
- A0A8C0RC77, A0A8C0TTC3, A0A8P0SSI9, A0A8P0SUQ0
- Conserved Domains (4) summary
-
- cd00024
Location:295 → 357
- CHROMO; Chromatin organization modifier (chromo) domain is a conserved region of around 50 amino acids found in a variety of chromosomal proteins, which appear to play a role in the functional organization of the eukaryotic nucleus. Experimental evidence ...
- pfam00385
Location:391 → 460
- Chromo; Chromo (CHRromatin Organisation MOdifier) domain
- pfam13907
Location:1437 → 1519
- DUF4208; Domain of unknown function (DUF4208)
- cl26465
Location:481 → 1034
- SNF2_N; SNF2 family N-terminal domain
-
XM_005618322.4 → XP_005618379.1 chromodomain-helicase-DNA-binding protein 2 isoform X1
- UniProtKB/TrEMBL
- A0A8C0RC77, A0A8P0SUQ0
- Conserved Domains (4) summary
-
- cd00024
Location:295 → 357
- CHROMO; Chromatin organization modifier (chromo) domain is a conserved region of around 50 amino acids found in a variety of chromosomal proteins, which appear to play a role in the functional organization of the eukaryotic nucleus. Experimental evidence ...
- pfam00385
Location:391 → 460
- Chromo; Chromo (CHRromatin Organisation MOdifier) domain
- pfam13907
Location:1484 → 1566
- DUF4208; Domain of unknown function (DUF4208)
- cl26465
Location:481 → 1034
- SNF2_N; SNF2 family N-terminal domain
-
XM_536179.7 → XP_536179.2 chromodomain-helicase-DNA-binding protein 2 isoform X2
- UniProtKB/TrEMBL
- A0A8C0MA63, A0A8C0RC77, A0A8P0ND39, A0A8P0SUQ0
- Conserved Domains (6) summary
-
- PLN03142
Location:468 → 1021
- PLN03142; Probable chromatin-remodeling complex ATPase chain; Provisional
- cd18661
Location:376 → 447
- CD2_tandem_CHD1-2_like; repeat 2 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 1 and 2, and similar proteins
- cd18666
Location:259 → 343
- CD1_tandem_CHD1-2_like; repeat 1 of the paired tandem chromodomains of chromodomain helicase DNA-binding protein 1 and 2, and similar proteins
- cd18054
Location:464 → 700
- DEXHc_CHD2; DEAH-box helicase domain of the chromodomain helicase DNA binding protein 2
- pfam13907
Location:1471 → 1553
- DUF4208; Domain of unknown function (DUF4208)
- pfam18375
Location:1130 → 1218
- CDH1_2_SANT_HL1; CDH1/2 SANT-Helical linker 1
-
XM_005618326.4 → XP_005618383.1 chromodomain-helicase-DNA-binding protein 2 isoform X7
- Conserved Domains (2) summary
-
- cd00024
Location:295 → 357
- CHROMO; Chromatin organization modifier (chromo) domain is a conserved region of around 50 amino acids found in a variety of chromosomal proteins, which appear to play a role in the functional organization of the eukaryotic nucleus. Experimental evidence ...
- pfam00385
Location:391 → 460
- Chromo; Chromo (CHRromatin Organisation MOdifier) domain