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Status
Public on Dec 15, 2011
Title
Agilent-026440 Sus scrofa (Pig) Oligo Microarray v2 (Feature Number version)
Technology type
in situ oligonucleotide
Distribution
commercial
Organism
Sus scrofa Manufacturer
Agilent Technologies
Manufacture protocol
See manufacturer's web site at http://www.agilent.com/
Description
Sus scrofa (Pig) Oligo Microarray v2
Submission date
Dec 14, 2011
Last update date
Jan 30, 2013
Organization
Agilent Technologies
E-mail(s)
cag_sales-na@agilent.com Phone
877-424-4536
URL
http://www.agilent.com Department
Street address
City
Palo Alto
State/province
CA
ZIP/Postal code
94304
Country
USA
Samples (286)
GSM951396 , GSM951397 , GSM951398 , GSM951399 , GSM951402 , GSM951405
GSM1155351 ,
GSM1155352 ,
GSM1155353 ,
GSM1155354 ,
GSM1155355 ,
GSM1155356 ,
GSM1155357 ,
GSM1155358 ,
GSM1155359 ,
GSM1155360 ,
GSM1155361 ,
GSM1155362 ,
GSM1155363 ,
GSM1155364 ,
GSM1155365 ,
GSM1155366 ,
GSM1156669 ,
GSM1156670 ,
GSM1156671 ,
GSM1156672 ,
GSM1156673 ,
GSM1156674 ,
GSM1156675 ,
GSM1156676 ,
GSM1156677 ,
GSM1156678 ,
GSM1156679 ,
GSM1156680 ,
GSM1156681 ,
GSM1156682 ,
GSM1156683 ,
GSM1156684 ,
GSM1156685 ,
GSM1156686 ,
GSM1156687 ,
GSM1156688 ,
GSM1156689 ,
GSM1156690 ,
GSM1156691 ,
GSM1156692 ,
GSM1156693 ,
GSM1156694 ,
GSM1156695 ,
GSM1156696 ,
GSM1156697 ,
GSM1156698 ,
GSM1156699 ,
GSM1156700 ,
GSM1156701 ,
GSM1156702 ,
GSM1156703 ,
GSM1156704 ,
GSM1156705 ,
GSM1156706 ,
GSM1156707 ,
GSM1156708 ,
GSM1156709 ,
GSM1156710 ,
GSM1156711 ,
GSM1156712 ,
GSM1156713 ,
GSM1156714 ,
GSM1156715 ,
GSM1156716 ,
GSM1156717 ,
GSM1156718 ,
GSM1156719 ,
GSM1156720 ,
GSM1156721 ,
GSM1156722 ,
GSM1156723 ,
GSM1156724 ,
GSM1156725 ,
GSM1156726 ,
GSM1156727 ,
GSM1156728 ,
GSM1156729 ,
GSM1156730 ,
GSM1156731 ,
GSM1156732 ,
GSM1156733 ,
GSM1156734 ,
GSM1156735 ,
GSM1156736 ,
GSM1156737 ,
GSM1156738 ,
GSM1156739 ,
GSM1156740 ,
GSM1156741 ,
GSM1156742 ,
GSM1156743 ,
GSM1156744 ,
GSM1156745 ,
GSM1156746 ,
GSM1156747 ,
GSM1156748 ,
GSM1156749 ,
GSM1156750 ,
GSM1156751 ,
GSM1156752 ,
GSM1156753 ,
GSM1156754 ,
GSM1156755 ,
GSM1156756 ,
GSM1156757 ,
GSM1156758 ,
GSM1156759 ,
GSM1156760 ,
GSM1156761 ,
GSM1156762 ,
GSM1156763 ,
GSM1156764 ,
GSM1156765 ,
GSM1156766 ,
GSM1156767 ,
GSM1156768 ,
GSM1156769 ,
GSM1156770 ,
GSM1260673 ,
GSM1260674 ,
GSM1260675 ,
GSM1260676 ,
GSM1260677 ,
GSM1260678 ,
GSM1260679 ,
GSM1260680 ,
GSM1260681 ,
GSM1260682 ,
GSM1260683 ,
GSM1260684 ,
GSM1260685 ,
GSM1260686 ,
GSM1260687 ,
GSM1260688 ,
GSM1525145 ,
GSM1525146 ,
GSM1525147 ,
GSM1525148 ,
GSM1525149 ,
GSM1525150 ,
GSM1525151 ,
GSM1525152 ,
GSM1525153 ,
GSM1533131 ,
GSM1533132 ,
GSM1533133 ,
GSM1533134 ,
GSM1533135 ,
GSM1533136 ,
GSM1533137 ,
GSM1533138 ,
GSM1533139 ,
GSM1533140 ,
GSM1533141 ,
GSM1533142 ,
GSM1533143 ,
GSM1533144 ,
GSM1533145 ,
GSM1533146 ,
GSM1533147 ,
GSM1533148 ,
GSM1533149 ,
GSM1533150 ,
GSM1533151 ,
GSM1533152 ,
GSM1533153 ,
GSM1533154 ,
GSM1533155 ,
GSM1533156 ,
GSM1533157 ,
GSM1533158 ,
GSM1533159 ,
GSM1533160 ,
GSM1533161 ,
GSM1533162 ,
GSM1664581 ,
GSM1664582 ,
GSM1664583 ,
GSM1664584 ,
GSM1664585 ,
GSM1664586 ,
GSM1664587 ,
GSM1664588 ,
GSM1664589 ,
GSM1664590 ,
GSM1858884 ,
GSM1858885 ,
GSM1858886 ,
GSM1858887 ,
GSM1858888 ,
GSM1858889 ,
GSM1858890 ,
GSM1858891 ,
GSM1858892 ,
GSM1858893 ,
GSM1858894 ,
GSM1858895 ,
GSM1858896 ,
GSM1858897 ,
GSM1858898 ,
GSM1858899 ,
GSM1858900 ,
GSM1858901 ,
GSM1858902 ,
GSM1858903 ,
GSM1858904 ,
GSM1858905 ,
GSM1858906 ,
GSM1858907 ,
GSM1858908 ,
GSM1858909 ,
GSM1858910 ,
GSM1858911 ,
GSM1858912 ,
GSM1858913 ,
GSM1858914 ,
GSM1858915 ,
GSM2043886 ,
GSM2043887 ,
GSM2043888 ,
GSM2448846 ,
GSM2448847 ,
GSM2448848 ,
GSM2448849 ,
GSM3270904 ,
GSM3270905 ,
GSM3270906 ,
GSM3270907 ,
GSM3523344 ,
GSM3523345 ,
GSM3523346 ,
GSM3523347 ,
GSM3564843 ,
GSM3564844 ,
GSM3564845 ,
GSM3564846 ,
GSM3564847 ,
GSM3564848 ,
GSM3564849 ,
GSM3564850 ,
GSM3564851 ,
GSM3564852 ,
GSM3564853 ,
GSM3564854 ,
GSM3564855 ,
GSM3564856 ,
GSM3564857 ,
GSM3564858 ,
GSM3564859 ,
GSM3564860 ,
GSM3564861 ,
GSM3564862 ,
GSM3564863 ,
GSM3564864 ,
GSM3564865 ,
GSM3564866 ,
GSM3564867 ,
GSM3564868 ,
GSM3564869 ,
GSM3564870 ,
GSM3564871 ,
GSM3564872 ,
GSM3564873 ,
GSM3564874 ,
GSM3564875 ,
GSM3564876 ,
GSM3564877 ,
GSM3564878 ,
GSM3564879 ,
GSM3564880 ,
GSM3564881 ,
GSM3564882 ,
GSM3564883 ,
GSM3564884 ,
GSM3564885 ,
GSM3564886 ,
GSM4211205 ,
GSM4211206 ,
GSM4211207 ,
GSM4211208 Series (18)
GSE38882 Comparative trascriptomic analysis between early-blastocyst and Hatched blastocyst
GSE47717 Effect of selection on residual feed intake on gene expression in porcine liver (20 kg body weight)
GSE47767 Effect of selection on residual feed intake on gene expression in porcine liver (115 kg body weight)
GSE47768 Effect of selection on residual feed intake on gene expression in pig skeletal muscle (20 kg body weight)
GSE47769 Effect of selection on residual feed intake on gene expression in porcine skeletal muscle (115 kg body weight)
GSE47770 Effect of selection on residual feed intake on gene expression in porcine subcutaneous adipose tissue (20 kg body weight)
GSE47771 Effect of selection on residual feed intake on gene expression in pig subcutaneous adipose tissue (115 kg body weight)
GSE52172 Transcriptional approach to study porcine tracheal epithelial cells individually or dually infected with swine influenza virus and Streptococcus suis
GSE62312 Local crosstalk between the lipid deposition and skeletal muscle growth inhibition from Bama minipig obesity model by high-fat high-sucrose diet
GSE62765 Effect of litter birth weight phenotype on transcriptomic response to swine influenza virus infection in pig lung
GSE68148 Oviductal transcriptome is modified after insemination during spontaneous ovulation in the sow
GSE72256 Pig-specific skin transcriptional responses after intradermal administration of flagellin
GSE77095 PIE cell line: Control vs. ETEC treated or Immunobiotic treated
GSE93225 PIE cell line: Control vs. Poly(I:C) treated or Immunobiotic treated
GSE117082 Piglet weight gain during the first two weeks of lactation influences the immune system development
GSE124171 Transcriptome alterations in porcine adipocytes downstream of TLR-2, -3 and -4 ligation
GSE125189 Granulosa cells of ovarian antral follicles exhibit distinct follicle size-related processes
GSE141695 Transcriptome modifications in the porcine intramuscular adipocytes during differentiation and exogenous stimulation with TNF-alpha and serotonin
Relations Alternative to
GPL16571
Data table header descriptions ID Agilent Feature Number
COL Column
ROW Row
NAME Probe Name
SPOT_ID Spot Identifier
CONTROL_TYPE Control Type
REFSEQ RefSeq Identifier
GB_ACC GenBank or RefSeq Accession
LOCUSLINK_ID LocusLink ID
GENE_SYMBOL Gene Symbol
GENE_NAME Gene Name
UNIGENE_ID UniGene ClusterID
ENSEMBL_ID Ensembl ID
TIGR_ID TIGR ID
ACCESSION_STRING Accession String
CHROMOSOMAL_LOCATION Chromosomal Location
CYTOBAND Cytoband
DESCRIPTION Description
GO_ID GO IDs
SEQUENCE Sequence
Data table ID COL ROW NAME SPOT_ID CONTROL_TYPE REFSEQ GB_ACC LOCUSLINK_ID GENE_SYMBOL GENE_NAME UNIGENE_ID ENSEMBL_ID TIGR_ID ACCESSION_STRING CHROMOSOMAL_LOCATION CYTOBAND DESCRIPTION GO_ID SEQUENCE 1
266
170
GE_BrightCorner
GE_BrightCorner
pos
2
266
168
DarkCorner
DarkCorner
pos
3
266
166
DarkCorner
DarkCorner
pos
4
266
164
DarkCorner
DarkCorner
pos
5
266
162
DarkCorner
DarkCorner
pos
6
266
160
DarkCorner
DarkCorner
pos
7
266
158
DarkCorner
DarkCorner
pos
8
266
156
DarkCorner
DarkCorner
pos
9
266
154
DarkCorner
DarkCorner
pos
10
266
152
DarkCorner
DarkCorner
pos
11
266
150
DarkCorner
DarkCorner
pos
12
266
148
A_72_P774000
A_72_P774000
FALSE
XM_001927438
XM_001927438 100157348 LOC100157348
olfactory receptor 2G6-like
ref|XM_001927438|ref|XM_001927408|ref|XM_001927423
unmapped
PREDICTED: Sus scrofa olfactory receptor 2G6-like (LOC100157348), mRNA [XM_001927438]
TGAAGTCAAAGGGGCACTAAGAAGACTAGTGAGGAGAACACCAGACTTGAGACAGAGTTA
13
266
146
A_72_P650049
A_72_P650049
FALSE
XM_001928981 100153677 CLIP1
CAP-GLY domain containing linker protein 1
Ssc.21890
ENSSSCT00000010735
ens|ENSSSCT00000010735|tc|TC547392|tc|TC603643
unmapped
Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:F1REW5] [ENSSSCT00000010735]
AGTAATAGTGGACCTTCAGAGGAAGAATCAGGACCTCAAGATGAAGGTGGAGATGATGTC
14
266
144
A_72_P259407
A_72_P259407
FALSE
XM_001927006
XM_001927006 100153931 PATZ1
POZ (BTB) and AT hook containing zinc finger 1
Ssc.5429
gb|XM_001926992|tc|TC537453|ref|XM_001927006
unmapped
PREDICTED: Sus scrofa POZ (BTB) and AT hook containing zinc finger 1, transcript variant 1 (PATZ1), mRNA [XM_001926992]
TTTGGGTTCTGTAGCTGAGAGATTTTTATTCGTTTTTAACTCCCCCTCCAGCCCTGTCAC
15
266
142
A_72_P718368
A_72_P718368
FALSE
XM_003356535 tc|TC538884
unmapped
Rep: Kinesin-like protein KIF13A - Mus musculus (Mouse), partial (15%) [TC538884]
TGAAGAAAGTAGCCGCTCCCATGCTGTGTTCAACATTATCATCACTCAGACGCTGTATGA
16
266
140
A_72_P331648
A_72_P331648
FALSE
unmapped
TCAGAAGTGAAATCAGAGAATGACATGGCTACAAAGGGACTTTTGAAGACCTGTAACCCA
17
266
138
A_72_P225442
A_72_P225442
FALSE
DN110489 Ssc.22288
gb|DN110489|tc|TC522935
unmapped
1108187 MARC 4PIG Sus scrofa cDNA 5', mRNA sequence [DN110489]
GACTGCGTCTGCTTAAACCTGTGGCCTTGGGCAAGTTACTTTAAACCTCAATAAACTTTT
18
266
136
A_72_P041431
A_72_P041431
FALSE
tc|TC581311
unmapped
Rep: Mediator of RNA polymerase II transcription subunit 31 - Mus musculus (Mouse), complete [TC581311]
GO:0005515(protein binding)
ATGAAGAGCTGGCAACAGCAGGCTCTAGGACATGTATATAATGCACTGCTATTGTACAGT
19
266
134
A_72_P652087
A_72_P652087
FALSE
NM_001031784
NM_001031784 595113 ARL1
ADP-ribosylation factor-like 1
Ssc.81872
ENSSSCT00000000948
ref|NM_001031784|ens|ENSSSCT00000000948|ens|ENSSSCT00000000950|gb|AY996810
unmapped
Sus scrofa ADP-ribosylation factor-like 1 (ARL1), mRNA [NM_001031784]
AAACACAGATGCAGTCATTTATGTAGTAGACAGTGTGACCGAGACCGAATTGGCATTTCC
20
266
132
A_72_P102096
A_72_P102096
FALSE
BX916346 Ssc.28807
gb|BX916346|tc|TC609736
unmapped
BX916346 Sus Scrofa library (scan) Sus scrofa cDNA clone scan0032.b.22 5prim, mRNA sequence [BX916346]
TAGGAGACCCTAGAGGATTGAGACTTTTGAGATGGGAGAAGGTGGAAGACCCTAGGACGG
45220 11179 Kbytes .Supplementary data files not provided
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