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Platform GPL1290 Query DataSets for GPL1290
Status Public on Jun 30, 2004
Title NCI cDNA array
Technology type spotted DNA/cDNA
Distribution non-commercial
Organism Homo sapiens
Description cDNA microarray used by NCI. See Ross et al., Nat Genet. 2000 Mar;24(3):227-35; Scherf et al, Nat Genet. 2000 Mar;24(3):236-44
Contributor(s) Shankavaram U, Weinstein JN
Submission date Jun 15, 2004
Last update date May 26, 2005
Contact name Jennifer Fostel
Phone 919 541 5055
Organization name NIEHS
Street address
City Research Triangle Park
State/province NC
ZIP/Postal code 27709
Country USA
Samples (64) GSM35908, GSM35909, GSM35910, GSM35911, GSM35912, GSM35913 
Series (1)
GSE2003 NCI cDNA microarray-human 60 cell lines

Data table header descriptions
NAME Gene name as pulled from Unigene by Stanford group
CLONE_ID I.M.A.G.E. consortium clone id
5ACC 5 Genbank accession number
3ACC 3 Genbank accession number

Data table
1 SID W 60204, Homo sapiens C2H2 zinc finger protein pseudogene, mRNA sequence [5':T39154, 3':T40438] IMAGE:60204 T39154 T40438 T39154, T40438
2 EST Chr.X [60298, (D), 5':T39213, 3':T40480] IMAGE:60298 T39213 T40480 T39213, T40480
3 RPL3 Ribosomal protein L3 Chr.22 [60436, (EW), 5':T39295, 3':T40510] IMAGE:60436 T39295 T40510 T39295, T40510
4 ESTSID 60474, [5':T39311, 3':T40516] IMAGE:60474 T39311 T40516 T39311, T40516
5 SID 60218, [5':T39165, 3':T40450] IMAGE:60218 T39165 T40450 T39165, T40450
6 EST Chr.18 [60268, (IR), 5':T39192, 3':T40467] IMAGE:60268 T39192 T40467 T39192, T40467
7 ESTs Chr.10 [60209, (RW), 5':T39163, 3':T40448] IMAGE:60209 T39163 T40448 T39163, T40448
8 Human 53K isoform of Type II phosphatidylinositol-4-phosphate 5-kinase (PIPK) mRNA, complete cds Chr.10 [60605, (RW), 5':T39411, 3':T40568] IMAGE:60605 T39411 T40568 T39411, T40568
9 SID 60664, ESTs [5':T39448, 3':T40595] IMAGE:60664 T39448 T40595 T39448, T40595
10 Human ribosomal protein S6 mRNA, complete cdsSID 60630, [5':T39422, 3':T40578] IMAGE:60630 T39422 T40578 T39422, T40578
11 CSH1 Chorionic somatomammotropin hormone 1 (placental lactogen) Chr.17 [60932, (IW), 5':T39603, 3':T40692] IMAGE:60932 T39603 T40692 T39603, T40692
12 ESTs Chr.17 [60731, (I), 5':T39509, 3':T40644] IMAGE:60731 T39509 T40644 T39509, T40644
13 Ribosomal protein L17SID 60561, [5':T39375, 3':T40540] IMAGE:60561 T39375 T40540 T39375, T40540
14 EST, Moderately similar to glycophorin HeP2 [H.sapiens] Chr.19 [60882, (R), 5':T39573, 3':T40668] IMAGE:60882 T39573 T40668 T39573, T40668
15 SID W 60694, Homo sapiens mRNA for SH3 binding protein, complete cds, clone:RES4-23A [5':T39472, 3':T40608] IMAGE:60694 T39472 T40608 T39472, T40608
16 SID 60566, EST [5':T39368, 3':T40535] IMAGE:60566 T39368 T40535 T39368, T40535
17 ESTs, Weakly similar to Y48E1B.1 [C.elegans] Chr.12 [61249, (I), 5':T39844, 3':T40837] IMAGE:61249 T39844 T40837 T39844, T40837
18 SID W 61259, ESTs [5':T39848, 3':T40841] IMAGE:61259 T39848 T40841 T39848, T40841
19 Chr. [61228, (I), 5':, 3':T40812] IMAGE:61228 T40812 T40812
20 *Hemoglobin gamma G SID 61196, ESTs [5':T39784, 3':T40792] IMAGE:61196 T39784 T40792 T39784, T40792

Total number of rows: 9706

Table truncated, full table size 1106 Kbytes.

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Supplementary data files not provided

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